5C98


Conserved Protein Domain Family
serpin18-like_insects

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cd19599: serpin18-like_insects 
Click on image for an interactive view with Cn3D
insect serpins similar to Anopheles gambiae Serpin 18
Serpins in insects function within development, wound healing and immunity. A. gambiae serpin 18 is categorized as non-inhibitory based on the sequence of its reactive-center loop. It is expressed throughout all life stages in multiple tissues and the hemolymph, and is predicted to be secreted based on the presence of a signal peptide. Insect serpins from mosquitoes are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.
Statistics
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PSSM-Id: 381063
Aligned: 6 rows
Threshold Bit Score: 543.568
Created: 23-Aug-2017
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
reactive center
Conserved site includes 21 residues -Click on image for an interactive view with Cn3D
Feature 1:reactive center loop (RCL)
Evidence:
  • Comment:depending on the conformational state, the RC loop is surface accessible in the active form or buried and inserted as the central beta strand in the inactive form.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
5C98_A        20 ANNKFTLEYFKacydeKCNCAVSPYHVRLALSMFYPLAGAAVQEDFQVAFGLPEdvh-aaIEQQQRLAQQLHdg-----q 93  African malaria...
XP_001848439  24 GNLDFTLKFFRkhynsSSNSIVSPISVRLALAALYQATGPKLDPTFQQAISIPTknkkkiADDIRAFLETTNse------ 97  southern house ...
XP_001870812  32 QSTNFSLNFYRhsfnpDENAIQSPVSVQATLSLLYHVASNSTAADMQAILGLPAakk-kpIPSLVEFLNSTGgsd----s 106 southern house ...
XP_019536550  25 STTSFTCDFFKqvfnpSENVVISPISIQTSLSMFYPLAGSKVSPDMQRLLYLPAdkn-qaTSNLRNFVQSLDkqtnigss 103 Asian tiger mos...
XP_001848442  11 SSTDFTFRFLQraytpTENAILSPVSIQSSLAMFYPLAGPAVSPDMQRHLNLPAdkt-iaTDNLRRFFASISkqqa-rpd 88  southern house ...
XP_001848447 434 RSTKFTLDFFRksfnaNENTVMSPISVQSTLALLYHVASENAATDMQRILELPPtad-qlIPDLRRFLGRTNnn------ 506 southern house ...
Feature 1                                                                                        
5C98_A        94 hLKALSFVLVEETlrLDSEFERLFHRTFQTTVEPVDLtddiPSALAVNSFYQRANTEIedfigegdvfslppcHKLMLFS 173 African malaria...
XP_001848439  98 hLRVLFKAYKLDNa-LDPTFEKTLQDVFGTSIDTVDFrdrvKVTNVVNRWVSDATNQLiekfvee--ssidpsTEFMLIN 174 southern house ...
XP_001870812 107 vLRMVAKVYHSPEd-LNTKFLPLLQDSYKVEVEEADFkqkqKVVDSVNRWVNSSTNGLipdlita--sdlkdnDRLILLN 183 southern house ...
XP_019536550 104 tFKMLSKVYHVDAe-LKPQVTPLFKETFRAEVELADFnnqaKVAASVNSWVDQATNGMikefmqa--devrvdNDLMLLN 180 Asian tiger mos...
XP_001848442  89 aLKVLSKVYHVDAe-LNPEVLPLFQGQFGAEVETANFqdqeTVVRSVNEWVDRSTGGLipnymep--gelrvdTDLMLLN 165 southern house ...
XP_001848447 507 vLKMVSKVYHSQEe-LNPEFLPVLQEALDVQVESTDFtqkqQVADSVNQWVDHSTNGMitdlinp--ddirddEQVILLT 583 southern house ...
Feature 1                                                                                        
5C98_A       174 GVSVLTPLAIRFNpadTALELFQFInaPTQRVSTMHTTAFVRRCLHNELRCKVVDMPFDAAsGLSMLVLLPYDgTELRQI 253 African malaria...
XP_001848439 175 AVALEARWANKFTl--NQTRQMTFHf-ENGDREVQMMSQVMSVSYKIAEDFHAAELLYTEKsDLSMWIILPRGrGSLGDL 251 southern house ...
XP_001870812 184 AITLDAKWEHPFP---KSSARKTFHf-VDGDHDVDIMSMDEEVSCGNLGDLNLLELPYESEtDLSMLFVMPKN-GSLQDL 258 southern house ...
XP_019536550 181 VVALNASWEVPFNpeeTESVNFHFVn-GDHPVQMMFKQEQILYANLPDHGCQAVELLYEDGtDLSMVVVLPMKkSSLENL 259 Asian tiger mos...
XP_001848442 166 VVALNASWQDPFDpeeTEESDFQFLn-GVRKVQMMHVAGEFQFGVVNEHNCYAVELNYEEDtDLSMVLILPKKkHTLQDI 244 southern house ...
XP_001848447 584 AITLNARWEIPFM---TVPWKRTFHf-VNGDREIDMMTEMDDYSYAEVDNLKVLEIPYEEHtDLSMVMIMPTK-ESLEDL 658 southern house ...
Feature 1                                                                                       #
5C98_A       254 VNSItPAHLAQIDErlqscWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEIDDLHVFHDsgrTRLNGFIQHCYLAVSESG 333 African malaria...
XP_001848439 252 VGSLtPELLANIRLgaktvSLNVELPRFTIRNEFDVNQVLEKMGHGGLFGNADLQVFAGs-kSEIDDIFQSAVIKVDEEG 330 southern house ...
XP_001870812 259 VNQLtLEFYERLNSalkleYGTVEIPKFSIQSKVKAKDVLQSMGLGSAFEVKAFKVFARk-pAQLSELRQKAVINVFETG 337 southern house ...
XP_019536550 260 VREFsVALYGKINErlsmeRIQLALPKFTMRKKIDAQQLLKNMGLKALFEELDLDLLVRd-kSRIGEIRQTTFIKVNEKG 338 Asian tiger mos...
XP_001848442 245 IQGLsLDLYRALDEslhkvRVAVAIPKFTMPKKLDAKELLMNMGLKSIFENLDFDLLTKy-kSKIGEVRQTGFIRVDEKG 323 southern house ...
XP_001848447 659 MKRFnMKLYKKLNSamrvtKGNIEIPKFTINSKIPAKDIMEKMGLGSVFGVDAFDVFVKk-gAQLSELRQRAVINVFEGG 737 southern house ...
Feature 1        ###############      #####                    
5C98_A       334 SGIPAPPDTPSEFEF------HANRPFMFLIRRTMDGNVLQVGNFS 373 African malaria mosquito
XP_001848439 331 TEASSGTRVNVKWRVgpr-pfFANKPFIFFIQKRSTNTILFIGQYS 375 southern house mosquito
XP_001870812 338 TTAAAVTEGQLAFHTiplelfIGNRPFIYLIRRTSTKEIFFIGHYS 383 southern house mosquito
XP_019536550 339 TEGAAATETQAVGRAgyp-nfYVDHPFLYLIRKRSTKDIIFIGHYS 383 Asian tiger mosquito
XP_001848442 324 TEAAAATDVQAVGRSsip-tfYANRPFLYLIRKRSTKDIIFIGHYS 368 southern house mosquito
XP_001848447 738 TTAAAVTEGRIVLLSgpsyefIADRPFVYLIRRQSTEEIFFIGHFS 783 southern house mosquito

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