2D1X


Conserved Protein Domain Family
SH3_Cortactin

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cd11959: SH3_Cortactin 
Click on image for an interactive view with Cn3D
Src homology 3 domain of Cortactin
Cortactin was originally identified as a substrate of Src kinase. It is an actin regulatory protein that binds to the Arp2/3 complex and stabilizes branched actin filaments. It is involved in cellular processes that affect cell motility, adhesion, migration, endocytosis, and invasion. It is expressed ubiquitously except in hematopoietic cells, where the homolog hematopoietic lineage cell-specific 1 (HS1) is expressed instead. Cortactin contains an N-terminal acidic domain, several copies of a repeat domain found in cortactin and HS1, a proline-rich region, and a C-terminal SH3 domain. The N-terminal region interacts with the Arp2/3 complex and F-actin, and is crucial in regulating branched actin assembly. Cortactin also serves as a scaffold and provides a bridge to the actin cytoskeleton for membrane trafficking and signaling proteins that bind to its SH3 domain. Binding partners for the SH3 domain of cortactin include dynamin2, N-WASp, MIM, FGD1, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212892
Aligned: 13 rows
Threshold Bit Score: 109.044
Created: 20-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Structure:2D1X; Human Cortactin SH3 domain binds Amap1 peptide; contacts at 4A.
    View structure with Cn3D
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  #  ##                 ##          # # ##   
2D1X_A        12 TAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVEL 64  human
P14317       432 SAVAVYDYQGEGSDELSFDPDDVITDIEMVDEGWWRGRCHGHFGLFPANYVKL 484 human
Q01406       509 TAIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVEL 561 chicken
4165055      531 RAKALYDYQATAEDELTFDPNEIITHVETIDDGWWKGVCRGKVGLFPANYVEM 583 Strongylocentrotus purpuratus
XP_002587255 495 TAIALYDYQAAAEDEISFDPDDVITNIEMIDEGWWRGECHGQVGLFPANFVEI 547 Florida lancelet
ADY40788     728 TAVAIYDYQKQDDDEISFEPDDIITNIDQVDAGWWRGMCNGQYGLFPANYVEL 780 pig roundworm
XP_002162600 336 TATALYDYQANDEDEITFDPDDQITNIEEVSEGWWKGTCRGKTGLFPANYVQI 388 green hydra
NP_001191512 523 MAIALYDYQATDSDELTFDPDEIITNIEMIDECWWRGSCRGVTGLFPANYVEL 575 California sea hare
AAH55600     152 TAVALYDYQAAGDDEISFDPDDIITNIEMIDEGWWRGVCRGAYGLFPANYVEV 204 zebrafish
BAA34397     502 HAIALYDYQAADDDEISFDPDDVITHIEKIDDGWWRGLCKNRYGLFPANYVQV 554 fruit fly
NP_001085871 506 TAIALYDYQAAGDDEISFDPDDIITNIEMIDEGWWRGLCKERYGLFPANYVER 558 African clawed frog
EFX88367     405 IAVALYDYQAAAEDELSFDPDEVIVNIEMIDEGWWRGECRGQIGLFPANYVQL 457 common water flea
XP_002399380 534 SAVALYDYQAADYDEISFDPDDIITDIETIDEGWWRGKCNGKVGLFPAQLRAA 586 black-legged tick

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