Conserved Protein Domain Family
Rap1a

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pfam18602: Rap1a 
Rap1a immunity proteins
The structures of the immunity proteins, Rap1a, responsible for the inhibition and neutralization of Ssp1 endopeptidase, revealed two distinct folds. The structure of the Ssp1-Rap1a complex revealed a tightly bound heteromeric assembly with two effector molecules flanking a Rap1a dimer. The Rap1a subunit displays a compact globular structure constructed from five alpha-helices that assemble to form the highly stable symmetric dimer.
Statistics
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PSSM-Id: 465818
Aligned: 130 rows
Threshold Bit Score: 40.6148
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
RLQ22261                 23 TIHELVSHCV-----------------HLDSDPEGADGQYCSS-------------YIRG-------FIDGavvtddril 65 
KIF42161                 14 TGESLLDLCR--------------------NETNEGFEIACHG-------------YIAG-------VVDTwmesagaaa 53 
SDV49162                 22 TGRQLYEW---------------------LNSSDEKLAMAANM-------------YIAG-------VMDDdtllqaga- 59 
PRJNA554229:FNU76_23830  26 TGNDLYRQ---------------------LNSTEDWERLMATS-------------YILG-------VVDAelftmavel 64 
jgi:Msip34_1628          38 TGTQLNNECI------------------------KVKSALCDG-------------YVMA-------VVDTys------- 66 
CAA0094087               28 KSNKIVKLCS--------------------VQDAELADVACQS-------------FVEG-------VVDAtaf------ 61 
WP_014103281             34 SGAYLryvCGv---------------dGEGKEAVRGGHAACQA-------------YISG-------VVDYhnl------ 72  Mica...
TPW34272                 34 TGKDLVGACAeelkqsa---gmekgksAPDVALNNLGMGMCVGmvymavnnqknlgVIYSrltdqftKVDTpqa------ 104
KKJ78104                 25 HGDLIYDACKngkqvgkrvylegelltTPDNLLAAKKGIYCAG-------------YIMA-------AEDD--------- 75 
WP_046502245             34 TGGALYAQCSp----------------PAETPKAEYGGLYCGG-------------YIMA-------IHDS--------- 68  Kilo...
RLQ22261                 66 rdlaqdednldalteralrtrmpgrsshYPPGSLTGFCLYDRV-PLREVVTTVVADLIA-RDI--DDFAHSPArvtVEDS 141
KIF42161                 54 vv---------------mrrlkrgvdyeTAALSFAGFCFYGTV-SLRQLSEVTIAYLEAnPKL--WHQPAAFV---VREA 112
SDV49162                 60 ---------------------ikgmyqaNNGKDIRHICLPAGT-TIGGLKAPVLELLEKyPNL--RAQPAIAT---VRVA 112
PRJNA554229:FNU76_23830  65 r------------------aakefkvskPRDYLISHFCFGGDV-TMEQIKDIVVKLLKDnPEI--RHKEAIFI---VRYA 120
jgi:Msip34_1628          67 --------------------------dmQEVYNQTAICLRPRV-TNTQLTAIVSKYLLAnPEE--WHFRASGI---VLKA 114
CAA0094087               62 --------------------------ygAAEQLVLPFCIPATT-TAAELVGVYRDYLND--NHalRQFSAAAL---AISA 109
WP_014103281             73 -------------------------mlsMKMAPEVRFCLPVNT-SMNRLHAVVLAYLNKnPQH--DTFVAAPA---VVMA 121 Mica...
TPW34272                105 --------------------------reFVAGFGPPVCTPRDA-TLQKDILGVMEYAAHhADQ--LHKSASGF---VAEA 152
KKJ78104                 76 ------------------------------LREKEAVCLPPRS-SKVSI-NAVIDYFEKhPEL--KKKNARIA---VDAA 118
WP_046502245             69 ------------------------------LKERVDFC--TYGdPTSYFVDQVMDYLKAhLEE--WSQSAPPL---IRKV 111 Kilo...
RLQ22261                142 LRDHYPC 148
KIF42161                113 FADAFPC 119
SDV49162                113 LAKAFPC 119
PRJNA554229:FNU76_23830 121 LVDSFPC 127
jgi:Msip34_1628         115 LSNAFPC 121
CAA0094087              110 FREQFPC 116
WP_014103281            122 LYESFPC 128 Micavibrio aeruginosavorus
TPW34272                153 LGATYPC 159
KKJ78104                119 IKAKFPC 125
WP_046502245            112 LIMENDC 118 Kiloniella litopenaei
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