Conserved Protein Domain Family
beta_Kdo_transferase_KpsC_2

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cd16439: beta_Kdo_transferase_KpsC_2 
beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase KpsC, repeat 2
KpsC is a beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase. It is part of the ATP-binding cassette transporter dependent capsular polysaccharides (CPSs) synthesis pathway, one of two CPS synthesis pathways present in Escherichia coli. The poly-Kdo linker is thought to be the common feature of CPSs synthesized via this pathway. CPSs are high-molecular-mass cell-surface polysaccharides that are important virulence factors for many pathogenic bacteria. KpsC contains a domain duplication.
Statistics
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PSSM-Id: 319747
Aligned: 160 rows
Threshold Bit Score: 327.478
Created: 22-Mar-2016
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P42217        365 SACVVWGVKgeqqwra-----eaqrksLPLWRMEDGFLRSSGLGSdllpPLSLVLDKRGIYYDATRPSDLEVLLNHSQLt 439  Escherichia coli
WP_017016891  113 DVFIVWGFNelysvkl-----yskktnIKTFRMEDGFIRSADLGSahtvPYSLVLDKTGFYYDCHQPSDVENLLNNYIGs 187  Enterovibrio ...
WP_004801878  132 EVVVIWGYTesfwlrm-----ylnlrnIPIWRMEDAFIRSASLGAthstPYSLVIDKTGLYYNGKKPSDIENLLSHYDFn 206  Acinetobacter...
WP_053013222    3 ESKELLSYAek--------------rsFPLFRMEDGFIRSSELGAehttPLALVLDKTGIYFNANQPSDLENILNDSDFd 68   [Polyangium] ...
WP_000161463   79 KTIYNWGAEippyi--------kelknLKIVRVEDGFIRSIGLGAehilPMSLCFDDCSIYYNAQEESRLEKLITTYRVn 150  Escherichia coli
AIJ47449      122 KKIVVWGYNdprffsf-----fikkmkLNVLRMEDGFLRSFDLGAshatPYSLIVDGVGLYFDPRSESEIERLLNSYEFt 196  Comamonas tes...
CAP42643      144 SAFFFWGFTeprmvrw-----yastrhIPTFRMEDGFIRSAALGAshatPYSLIVDSKGLYYDPNRESDIEAILNEYNFs 218  Bordetella pe...
WP_014422065   96 LKIFCWGNKypktfpkntyfskskkkkIQVSRIEDGFLRSIGSGVlhtrPASLCVDDLGIYFDASRPSRLEEIINDPEEl 175  Marinobacter ...
KCB21001      121 SVFIFWGMTepwlvcq-----yaklkrMPILRMEDGFLRSANLGAahstPYSLLLDSRGIHYNPDGNSDLRDVLNNYEFs 195  Bordetella hi...
WP_050988303  121 RDLMIWGYNdaslwlt----rlakrlgYNVYRMEDGFVRSVELGAnhstPYSLVVDNKGLYFNPREPSELEDILNSDPRl 196  Sinorhizobium...
P42217        440 l--aqQMRAEKLRQr-LVESKLSKYNlgadfsl--paeakdkKIILVPGQVEDDASIKTGtvsikSNLELLRTVRERNpH 514  Escherichia coli
WP_017016891  188 s--seLETAESLLKk-FVDSNLSKYNlpssstekitdkiktkKRVLVIGQVDSDQSIKRGnpkniNSEELVKIAREENpS 264  Enterovibrio ...
WP_004801878  207 kdeklKKDAQKILDy-IINQDITKYNppvvchd---ntlkikKRILVVGQVDNDSSLRYGnpdkwTMEDMVRLAKRENpT 282  Acinetobacter...
WP_053013222   69 ad-avLMQQAKALLqvLRLLKVSKYNlgslapaheilgpkykKRVLVLGQVELDAGVRYGmagdwDSASLIRLARSENpQ 147  [Polyangium] ...
WP_000161463  151 p--yeVEKARRIINk-IKTNKISKYNitgttii--knlpknkKKVLVIGQVEEDQSIKYGashgiNNKLLLHKAIAENpG 225  Escherichia coli
AIJ47449      197 k--knIDDSRECLKl-LHDLKLSKYNsqgiiqrd-evdykfsRRVAVIGQVDGDQSIRLGninrwSIEQLIKLAKFENpD 272  Comamonas tes...
CAP42643      219 d--teLAAAEESLNl-IRALDIAKYNppsfnggq-gggikirRKIAVIGQVDNDMSIRLGnvdkwTMIELIRLAKFENpD 294  Bordetella pe...
WP_014422065  176 sapelLKEAGVVASl-IRSGRLTKYYdpdpymerlrqnptgeKTILVIGQVEDDASLLKGkasvaSNYDLVKLARKENpN 254  Marinobacter ...
KCB21001      196 e--seLHHARECLDl-LSSMRLSKYNpptlnisk-gsgikirRRVAVIGQVDSDRSITLGnfsrwSMKEVIQLAKIENpD 271  Bordetella hi...
WP_050988303  197 hdpefLGRARKHLDf-ILETNLTKYNglrgaaee-flsirrrEVVLVIGQVPGDASIVYGnpdrwTSESLVALARSENpG 274  Sinorhizobium...
P42217        515 AYIIYKPHPDVLVGnrkgni-pteliaELADYQALDADIIQCIQraDEVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGL 593  Escherichia coli
WP_017016891  265 ADVIYRPHPDVFLGyqksri-rkksieEYARLVSPNEPFISSLEsvDHVYTISSLSGIEAVLRGIKVTTLGAPFYSGWGL 343  Enterovibrio ...
WP_004801878  283 AEILYRPHPEVYEGfqkskl-kkenieNYAKVISPDEHIIELINrvDHVYTLTSLTGLDALLRGKEVTVLGTPFYAGWGL 361  Acinetobacter...
WP_053013222  148 AEILYRPHPEVIRKfrenst-dleelkKICRVITEDIAVNELFQhvDRVYTISSLSGFEALIHGIPVTVVGAPFYAGWGL 226  [Polyangium] ...
WP_000161463  226 AMIIYRPHPDVNNGlrknisnpeksnsICHILDDKNIDLCWLLDniDHVYTITSLTGFEALLRGKKVTTFGTPFYAGWGL 305  Escherichia coli
AIJ47449      273 AEIIYRPHPDVYNGfqksil-kkrrvaKYCTIVSPTSNQIEFLNsvDHVYTITSLSGLEALLLGKKVTVVGQPFYAGWGL 351  Comamonas tes...
CAP42643      295 AQIVYRPHPEVYKGyqkskf-rarvvtAICEIANPDVPLGQFLGtvDHVYTITSLSGLEALLRGKKVTVVGAAFYAGWGL 373  Bordetella pe...
WP_014422065  255 ARVLFRPHPDYWSGirkrig-kergykDLCHVVPPSVSLYELFSvsDHVYTITSLSGFEALIYGLKVTTLGAPFYSNWGL 333  Marinobacter ...
KCB21001      272 ADIVYRPHPDVYKGyqrsrf-aarsvqNICEIVDPEIALSEFLDtvDQVYTLTSLSGLEALFRGVKVTVLGAAFYGGWGL 350  Bordetella hi...
WP_050988303  275 CDIIYRPHPDVYNKphlyke-rrgviaKMATIVPPTVGLLDLLKsvKRVYTISSLVGMEAVMRDIPVTTVGLPFYAGWGV 353  Sinorhizobium...
P42217        594 TVDehh-------cprREQKLTIADLIYQTLIVYPTY 623  Escherichia coli
WP_017016891  344 TDDrve-------isrRNRNLNLVEFFNIAYILYPKY 373  Enterovibrio calviensis
WP_004801878  362 TDDrck-------fkrRHRKLSLLELFSAAYILYPDY 391  Acinetobacter sp. CIP 56.2
WP_053013222  227 TDDral-------vprRRRVLTLEQLFCGAYLLYPRY 256  [Polyangium] brachysporum
WP_000161463  306 TDDrgl-------irnRNIKRSIEEVFFCAYILYPTY 335  Escherichia coli
AIJ47449      352 TDDrve-------vprRNRSLKLEELFYAIYLKYPRY 381  Comamonas testosteroni TK102
CAP42643      374 TDDrvk-------lprRTRQRSLIELFAAIYLKYPKY 403  Bordetella petrii
WP_014422065  334 TDDrvk-------lrrRNKSRSIEQLVAAAYLKYPVY 363  Marinobacter hydrocarbonoclasticus
KCB21001      351 TDDrfdf-----rrydRNRSRTLEELFAAIYLKYPRY 382  Bordetella hinzii OH87 BAL007II
WP_050988303  354 TDDqcserrggaayrrRRAKLSSLQLFAGTYLLYAKY 390  Sinorhizobium sp. CCBAU 05631
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