1KBF


Conserved Protein Domain Family
C1_KSR1

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cd20872: C1_KSR1 
protein kinase C conserved region 1 (C1 domain) found in kinase suppressor of Ras 1 (KSR1) and similar proteins
KSR1 functions as a transducer of TNFalpha-stimulated C-Raf activation of ERK1/2 and NF-kB. Detected activity of KSR1 is cell type specific and context dependent. It is inactive in normal colon epithelial cells and becomes activated at the onset of inflammatory bowel disease (IBD). Similarly, KSR1 activity is undetectable prior to stimulation by EGF or ceramide in COS-7 or YAMC cells, respectively. KSR proteins are widely regarded as pseudokinases, however, this matter is up for debate as catalytic activity has been detected for KSR1 in some systems. KSR proteins contain a SAM-like domain, a zinc finger cysteine-rich domain (C1), and a pseudokinase domain. This model describes the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410422
Aligned: 7 rows
Threshold Bit Score: 70.4572
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding site
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Structure:1KBF; Mus musculus KSR1 binds two Zn2+ ions.
    View structure with Cn3D
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #           #  #         #  #    #  #      # 
1KBF_A         3 VTHRFSTKSWLSQVCNVCQKSMIFGVKCKHCRLKCHNKCTKEAPACR 49   house mouse
Q8IVT5       346 VTHRFSTKSWLSQVCHVCQKSMIFGVKCKHCRLKCHNKCTKEAPACR 392  human
KFP06092     267 VTHRFSTKSWLSQICQVCQKSMMFGVKCKYCRLKCHNKCTKEAPACR 313  Anna's hummingbird
OCT92372     330 VTHRFSTKSWLSQICHVCQKSMMFGVKCKHCKLKCHNKCTKDAPSCR 376  African clawed frog
XP_007898885 430 ITHRFSTKSWLSQTCQVCQRSMMFGVKCKHCRLKCHNKCTKEAPACR 476  elephant shark
CAE17640     320 VTHRFSTKSWLSQTCQVCKKNMMFGVKCKHCKVKCHNKCTKEAPKCR 366  zebrafish
XP_014346901 428 VTHRFATRSWLSQTCQVCHKNMMLGVKCKHCRLKCHNKCTKEAPACR 474  coelacanth

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