1T61,1T61,1T60,1T60


Conserved Protein Domain Family
C4

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pfam01413: C4 
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C-terminal tandem repeated domain in type 4 procollagen
Duplicated domain in C-terminus of type 4 collagens. Mutations in alpha-5 collagen IV are associated with X-linked Alport syndrome.
Statistics
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PSSM-Id: 460201
Aligned: 110 rows
Threshold Bit Score: 119.622
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1T61_F        113 VAIAVHSQDVSI-PHCPAGWRSLWIGYSFLMHTAAGdEGGGQSLVSPGSCLEDFRATPFIECNGArGTCHYYANKYSFWL 191  cattle
XP_009012334 1662 NVLTVHSQDITE-PRCPLGWKALWVGYSFFMHIVHGvSGGGQQLVSSGSCLEDFRVLPFIECVe--GKCQFPMNDMSYWM 1738
EDV21329     1399 PVAAFHSQTSTA-PSCPNGWQQLWEGYSYIMQTGTGnQGSGQQLQSPGSCLRNFRSQPFIECNSr-GTCINTVGGLSFWM 1476
EDV21231      175 NSIALHSQSQTP-PSCPSGYELLWQGYSYWMHTGQGkSVAGQDLSSPGSCLRRFQSMPFIECDGPsGSCFFYSNSKSFWV 253 
CDS36949     1665 NLVAFHSQRPYLeESCPPGWEHAWNGFSMPMVVSAAvSGGVQPLHSPGSCLMNFRALPFIECNNHhGNCFHWQDGRSYWL 1744
XP_018648995 1655 KLYAFHSQTLKI-PKCPDGWSTLWPGSSFFMNTGYGaQGGGQQLASPGSCLPQFRSHMFIECTAk-GLCGFFEEHKNFWL 1732
XP_009015091 1363 IAMAIHSQTRNV-PDCPPGWSSLWIGYSFFMQA-AGrSGTGQQLSSTGSCLEDFRTTPFIECSTErGSCHYYPDKVSFWL 1440
XP_021204597 1638 RTIAIHSQSSEV-PTCPDKWKELWVGYSFLMHT-AGaDASGQSLISPGSCLREFRTRPFIECNGl-GRCNYFATAVSYWL 1714
XP_002424552 1629 RVIAVHSQSNDI-PNCPNGWENLWIGYSFLMHTASGaDGSGQSLISPGSCLLEFRPTPFIECHGv-GRCNYFSNSYSYWL 1706 human body louse
XP_009025072  620 QPIAIHSQATSV-PDCPRGWSNIWSGFSLALMTGEGgLGVGQTLHSPGSCLTTFRSSPVFECHGd-GKCNHYANHISYFL 697 
1T61_F        192 TTIPe----QSfqgtPSADTLKAGL-IRTHISRCQVCMK 225  cattle
XP_009012334 1739 TTVDv---nSQfl-tPNSRTLKAGS-LRSVISRCSVCSR 1772
EDV21329     1477 KAINa---sQQfd-pPTQQVLSASA-TSSEISRCIVCKK 1510
EDV21231      254 TAVNv---tDQfe-pPTATVLNFNDnPQSYISRCSVCLR 288 
CDS36949     1745 RAMTf---nEQft-kPAGATYKTD--LLRQVSRCSVCRK 1777
XP_018648995 1733 RVMPssmdeHMfg-mVMGTVIKVRN-SQDSVGKCAVCMR 1769
XP_009015091 1441 SAFEp---yEQfe-kPQHNKYQGGN-LRDYVSRCHVCAK 1474
XP_021204597 1715 STINd---nWMfq-kPIQETLKTDK--DSRVSRCTVCMR 1747
XP_002424552 1707 STLNe---rDMfs-kPRQQTLKAGL-LETRISRCSVCMR 1740 human body louse
XP_009025072  698 SVLDr---fNQys-kPMSDTYKAAN-LMNKISRCSVCLA 731 
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