3EGD,2DMW,3TJZ,1NRJ,2J3T


Conserved Protein Domain Family
longin-like
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cd14818: longin-like 
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Longin-like domains
Longin-like domains are small protein domains present in a variety of proteins and members of protein complexes involved in or required for different steps during the transport of proteins from the ribosome to the ER to the plasma membrane, via the Golgi apparatus. Examples are mu and sigma subunits of the heterotetrameric adaptor protein (AP) complex, zeta and delta subunits of the heterotetrameric F-COPI complex, a subgroup of R-SNARE proteins, a subfamily of the transport protein particle (TRAPP), and the signal recognition particle receptor subunit alpha (SR-alpha).
Links
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Statistics
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PSSM-Id: 341426
Aligned: 5 rows
Threshold Bit Score: 80.2618
Created: 23-Dec-2011
Updated: 2-Aug-2017
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3EGD_C   3 LLTMIArvadglPLAASMqedeqsgr--------dlqqyqsQAKQLFRKlneq--------------sptRCTLEag--- 57  human
2DMW_A  11 LFAVVArg--ttILAKHAwcgg---------------nfleVTEQILAKips---------------ennKLTYShg--- 55  human
3TJZ_C  14 KAILILdnd-gdRLFAKYyddtyps----------vkeqkaFEKNIFNKthr----------------tdSEIALle--- 63  cattle
1NRJ_A   3 DQLAVFtpq-gqVLYQYNclgkk--------------fseiQINSFISQlitspvtrkesvanantdgfdFNLLTinseh 67  baker's yeast
2J3T_C   4 HNLYLFdrn-gvCLHYSEwhrkkqagipkeeeyklmygmlfSIRSFVSKmspld------------mkdgFLSFQts--- 67  house mouse

3EGD_C  58 ----aMTFHYIIeq--gvCYLVLCEaa--fPKKLAFAYLEDLHSEFDEQHgkkvptvs------------------rpys 111 human
2DMW_A  56 ----nYLFHYICqd--riVYLCITDdd--fERSRAFNFLNEIKKRFQTTYgsraqtap------------------pyam 109 human
3TJZ_C  64 ----gLTVVYKSsi--dlYFYVIGSsy--eNELMLMTVLNCLFDSLSQMLrknvekra------------------llen 117 cattle
1NRJ_A  68 knspsFNALFYLnkqpelYFVVTFAeqtleLNQETQQTLALVLKLWNSLHlsesilknrqgqneknkhnyvdilqgiedd 147 baker's yeast
2J3T_C  68 ----rYKLHYYEtpt-giKVVMNTDlgvgpIRDVLHHIYSALYVEFVVKNplcplgq--------------------tvq 122 house mouse

3EGD_C 112 fieFDTFIQKT 122 human
2DMW_A 110 nseFSSVLAAQ 120 human
3TJZ_C 118 megLFLAVDEI 128 cattle
1NRJ_A 148 lkkFEQYFRIK 158 baker's yeast
2J3T_C 123 selFRSRLDSY 133 house mouse
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