3SZJ,2Y32,1RAV,2OF9,4BJ8


Conserved Protein Domain Family
Avidin

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pfam01382: Avidin 
Click on image for an interactive view with Cn3D
Avidin family
Statistics
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PSSM-Id: 460182
Aligned: 29 rows
Threshold Bit Score: 100.457
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3SZJ_B         9 AMSAWVNQDGSTLYINSINa-qGELTGSYINRAAGFac--qnSPYPVNGW-----------VFGTAISFSTKWLNSve-s 73  Shewanella deni...
Q63Y77        42 FSGTWKNELGSTMRIEQSG---DSVSGTYESAVSENgg---aTSGQLSGY-----------VDGDLIAFVVHWDQF---- 100 Burkholderia ps...
CBA15444      33 PLGRWKNELGSTLIVSEFDassGKISGNYISPSGTTg-----SEYPMVGWinnas--ptksNNRTVFTFSVRWGTY---- 101
Q63V51        46 PIGSWLNELGSTMTIASISg-tGAITGTYVSPSGTTg-----QTFSLSGWfyaappannglDQVTLVTFSVNWNNTaa-r 118 Burkholderia ps...
WP_012732748  34 LVGSWGNQLGSTMKIQSVDpvtGAITGTYRSPSGTSg-----QFFPLVGWtntap-aqsgqDNVTLVSFTVNWGSY---- 103 Burkholderia gl...
2Y32_B         3 VNWTWTNQYGSTLAITSFNsntGAITGTYTNNAANScd--egKPQGVTGWla-------ygNTGTAISFSVNFLGC---- 69  Bradyrhizobium ...
Q218I6        29 VSWTWTNQYGSVLAITTYNqsnGAITGTYTNKAAGScd--dgKPQAAAGWla-------agNTGSAISFSVNFAGC---- 95  Rhodopseudomona...
EDV25964      77 LSGFWFNQHGSVLFLHHRKd--GFLAGSFRTLVESTkgaagrGGRKVRGNvahpk-hvytkDKPVALSFSVAFDG----- 148
XP_019853889  89 LSGTWTNELGSQMVISTSSyaeGQMNGIYNSKVGDAy-----EYYWFYGMydt-----dgdETAGTLGWTVQWDNTsngn 158
XP_019853878  90 LAGVWTNELGSKMFISASSyaeGQINGLYCSKVGDAy-----DYYDLNGLydt-----dgdETSGTLGWTVQWNNGpngn 159
3SZJ_B        74 cNSITSWSGFYINT--GGQGKISTLWQLVVNGSS-----SPSqiLKGQDVFS 118 Shewanella denitrificans OS217
Q63Y77       101 -QAITAWVGQGGPG--ASSDRINTLWQMTQQVEAge-ewASI--NAGADIFV 146 Burkholderia pseudomallei
CBA15444     102 -GSVTAWTGTCVDGtkYKPALITTLWHLARGSSDys--wDHV--LTNTDGFa 148
Q63V51       119 yNSITTWSGLCQIT--NNVPTITALYYYSNAFAQys--wKHV--NVGQDIFH 164 Burkholderia pseudomallei
WP_012732748 104 -GTITSWSGLCRTQ--NQVPTIAALWYFAQSNAQft--wSHV--QTGQDVFS 148 Burkholderia glumae
2Y32_B        70 -GSTTVWTGQL-----NNATGFQGLWYLSLAEAVa---wNGI--SAGADTFT 110 Bradyrhizobium japonicum
Q218I6        96 -SSTTVWTGQL-----NSNAGFQGLWLLSLAEPVa---wNGI--SAGADTFT 136 Rhodopseudomonas palustris BisB18
EDV25964     149 -GSTTAWSGEYQVC--NDTPLILTTWILTKPSRNcdghwAST--LIGKDTFK 195
XP_019853889 159 sQSNTAWSGQRYEI--SGTYYIYSTWILVSQTSSdd-nwEST--LVGQDKFS 205
XP_019853878 160 sQSNTAWSGQRYEI--SGKLYIYTTWLLVSQETLen-nwEST--LTGKDKFC 206
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