PDCD1[gene] - ClinVar

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Items: 93

	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 59158	GRCh38/hg38 2q32.2-37.3(chr2:188818195-242065208)x3	AAMP, ABCA12 +1703 more	Copy number gain	See cases	GPathogenic
Select item 59159	GRCh38/hg38 2q32.2-37.3(chr2:190310736-241892770)x3	AAMP, ABCA12 +1665 more	Copy number gain	See cases	GPathogenic
Select item 146683	GRCh38/hg38 2q34-37.3(chr2:210579676-242126245)x3	LOC129935841, LOC129935842 +1148 more	Copy number gain	See cases	GPathogenic
Select item 155149	GRCh38/hg38 2q35-37.3(chr2:218101759-242126245)x3	LOC129935871, LOC129935872 +986 more	Copy number gain	See cases	GPathogenic
Select item 59173	GRCh38/hg38 2q36.3-37.3(chr2:227803148-242086301)x3	ACKR3, AGAP1 +630 more	Copy number gain	See cases	GPathogenic
Select item 161051	GRCh38/hg38 2q37.1-37.3(chr2:231770279-242126245)x1	ACKR3, AGAP1 +455 more	Copy number loss	See cases	GPathogenic
Select item 34724	GRCh38/hg38 2q37.1-37.3(chr2:231770279-242126245)x1	LOC129935973, LOC129935974 +455 more	Copy number loss	See cases	GPathogenic
Select item 58851	GRCh38/hg38 2q37.1-37.3(chr2:233420162-242086301)x1	LOC129935990, LOC129935991 +361 more	Copy number loss	See cases	GPathogenic
Select item 58852	GRCh38/hg38 2q37.1-37.3(chr2:233453611-242099155)x1	ACKR3, AGAP1 +359 more	Copy number loss	See cases	GPathogenic
Select item 58879	GRCh38/hg38 2q37.1-37.3(chr2:234172536-242086301)x1	LOC126806577, LOC126806578 +334 more	Copy number loss	See cases	GPathogenic
Select item 57457	GRCh38/hg38 2q37.1-37.3(chr2:234345842-242126245)x1	HDAC4, HDAC4-AS1 +334 more	Copy number loss	See cases	GPathogenic
Select item 58880	GRCh38/hg38 2q37.1-37.3(chr2:234668159-242126245)x1	PRLH, PRR21 +325 more	Copy number loss	See cases	GPathogenic
Select item 147967	GRCh38/hg38 2q37.2-37.3(chr2:234835780-242065208)x1	ACKR3, AGAP1 +318 more	Copy number loss	See cases	GPathogenic
Select item 147844	GRCh38/hg38 2q37.2-37.3(chr2:235028429-242066108)x1	ACKR3, AGAP1 +314 more	Copy number loss	See cases	GPathogenic
Select item 59176	GRCh38/hg38 2q37.2-37.3(chr2:235268768-242126245)x3	ACKR3, AGAP1 +311 more	Copy number gain	See cases	GPathogenic
Select item 58882	GRCh38/hg38 2q37.2-37.3(chr2:235268768-242065208)x1	ACKR3, AGAP1 +309 more	Copy number loss	See cases	GPathogenic
Select item 59177	GRCh38/hg38 2q37.2-37.3(chr2:235563664-242086301)x3	ACKR3, AGAP1 +303 more	Copy number gain	See cases	GPathogenic
Select item 58883	GRCh38/hg38 2q37.2-37.3(chr2:235741079-242032456)x1	ACKR3, AGAP1 +298 more	Copy number loss	See cases	GPathogenic
Select item 151026	GRCh38/hg38 2q37.3(chr2:236413722-242126251)x1	LOC122889015, LOC122889016 +287 more	Copy number loss	See cases	GPathogenic
Select item 57420	GRCh38/hg38 2q37.3(chr2:236555233-242126245)x1	ACKR3, AGXT +276 more	Copy number loss	See cases	GPathogenic
Select item 1684635	Single allele	GPC1-AS1, GPR35 +274 more	Deletion	Chromosome 2q37 deletion syndrome	GPathogenic
Select item 150710	GRCh38/hg38 2q37.3(chr2:236775762-242126251)x1	AGXT, ANKMY1 +274 more	Copy number loss	See cases	GPathogenic
Select item 146261	GRCh38/hg38 2q37.3(chr2:236966763-242065208)x1	AGXT, ANKMY1 +271 more	Copy number loss	See cases	GPathogenic
Select item 146602	GRCh38/hg38 2q37.3(chr2:237034476-242065208)x1	AGXT, ANKMY1 +270 more	Copy number loss	See cases	GPathogenic
Select item 147368	GRCh38/hg38 2q37.3(chr2:237232204-242065208)x1	AGXT, ANKMY1 +264 more	Copy number loss	See cases	GPathogenic
Select item 58885	GRCh38/hg38 2q37.3(chr2:237526184-241996090)x1	LOC129935970, LOC129935971 +251 more	Copy number loss	See cases	GPathogenic
Select item 57432	GRCh38/hg38 2q37.3(chr2:237643996-242126245)x1	COPS9, CROCC2 +250 more	Copy number loss	See cases	GPathogenic
Select item 151032	GRCh38/hg38 2q37.3(chr2:237902870-242126251)x1	AGXT, ANKMY1 +235 more	Copy number loss	See cases	GPathogenic
Select item 149058	GRCh38/hg38 2q37.3(chr2:238833519-242126245)x1	AGXT, ANKMY1 +185 more	Copy number loss	See cases	GPathogenic
Select item 147508	GRCh38/hg38 2q37.3(chr2:240067206-242126245)x1	AGXT, ANKMY1 +145 more	Copy number loss	See cases	GPathogenic
Select item 58910	GRCh38/hg38 2q37.3(chr2:240067206-242086301)x1	FAM240C, FARP2 +143 more	Copy number loss	See cases	GPathogenic
Select item 146578	GRCh38/hg38 2q37.3(chr2:240171137-242065208)x1	AGXT, ANKMY1 +138 more	Copy number loss	See cases	GPathogenic
Select item 149568	GRCh38/hg38 2q37.3(chr2:240187901-242126245)x1	AGXT, ANKMY1 +140 more	Copy number loss	See cases	GLikely pathogenic
Select item 151964	GRCh38/hg38 2q37.3(chr2:240228628-242126245)x1	AGXT, ANKMY1 +140 more	Copy number loss	See cases	GUncertain significance
Select item 58911	GRCh38/hg38 2q37.3(chr2:240444819-242086301)x1	AGXT, ANKMY1 +131 more	Copy number loss	See cases	GPathogenic
Select item 146232	GRCh38/hg38 2q37.3(chr2:240507151-242065208)x1	AGXT, ANKMY1 +127 more	Copy number loss	See cases	GLikely pathogenic
Select item 152539	GRCh38/hg38 2q37.3(chr2:240671231-242092126)x1	LOC132088835, LOC132088836 +96 more	Copy number loss	See cases	GLikely pathogenic
Select item 58914	GRCh38/hg38 2q37.3(chr2:241249295-242086301)x1	ATG4B, BOK +56 more	Copy number loss	See cases	GPathogenic
Select item 144757	GRCh38/hg38 2q37.3(chr2:241481406-242126245)x1	ATG4B, BOK +44 more	Copy number loss	See cases	GUncertain significance
Select item 144361	GRCh38/hg38 2q37.3(chr2:241522479-242126245)x3	ATG4B, BOK +39 more	Copy number gain	See cases	GUncertain significance
Select item 153126	GRCh38/hg38 2q37.3(chr2:241565848-242110155)x1	ATG4B, BOK +32 more	Copy number loss	See cases	GUncertain significance
Select item 57280	GRCh38/hg38 2q37.3(chr2:241582713-242065208)x1	ATG4B, D2HGDH +29 more	Copy number loss	See cases	GUncertain significance
Select item 144276	GRCh38/hg38 2q37.3(chr2:241770998-241996090)x1	FAM240C, GAL3ST2 +9 more	Copy number loss	See cases	GBenign
Select item 1255049	NM_005018.3(PDCD1):c.*889G>A	PDCD1	Single nucleotide variant (3 prime UTR variant)	not provided	GBenign
Select item 3026042	NM_005018.3(PDCD1):c.804T>G (p.Ala268=)	PDCD1	Single nucleotide variant (synonymous variant)	not provided +1 more	GLikely benign
Select item 1226460	NM_005018.3(PDCD1):c.804T>C (p.Ala268=)	PDCD1	Single nucleotide variant (synonymous variant)	PDCD1-related disorder +2 more	GBenign
Select item 1282693	NM_005018.3(PDCD1):c.644C>T (p.Ala215Val)	PDCD1 (A215V)	Single nucleotide variant (missense variant)	not provided +1 more	GBenign
Select item 3210522	NM_005018.3(PDCD1):c.633G>T (p.Glu211Asp)	PDCD1 (E211D)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 1257448	NM_005018.3(PDCD1):c.628-110A>G	PDCD1	Single nucleotide variant (intron variant)	not specified +1 more	GBenign
Select item 1270664	NM_005018.3(PDCD1):c.627+252C>T	PDCD1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1265148	NM_005018.3(PDCD1):c.627+189G>A	PDCD1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 9251	NM_005018.3(PDCD1):c.627+189G>C	PDCD1	Single nucleotide variant (intron variant)	Multiple sclerosis modifier of disease progression +1 more	Grisk factor
Select item 1251704	NM_005018.3(PDCD1):c.593-61dup	PDCD1	Duplication (intron variant)	not provided	GBenign
Select item 1260387	NM_005018.3(PDCD1):c.593-56C>G	PDCD1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 2398088	NM_005018.3(PDCD1):c.581G>A (p.Arg194Gln)	PDCD1 (R194Q)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 3045064	NM_005018.3(PDCD1):c.480C>G (p.Pro160=)	PDCD1	Single nucleotide variant (synonymous variant)	PDCD1-related disorder	GLikely benign
Select item 3039619	NM_005018.3(PDCD1):c.437-8C>T	PDCD1	Single nucleotide variant (intron variant)	PDCD1-related disorder	GLikely benign
Select item 1233776	NM_005018.3(PDCD1):c.437-115G>A	PDCD1	Single nucleotide variant (intron variant)	not provided +1 more	GBenign
Select item 3042975	NM_005018.3(PDCD1):c.436+10C>T	PDCD1	Single nucleotide variant (intron variant)	PDCD1-related disorder	GLikely benign
Select item 2333454	NM_005018.3(PDCD1):c.347A>T (p.Asn116Ile)	PDCD1 (N116I)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2531224	NM_005018.3(PDCD1):c.344G>A (p.Arg115His)	PDCD1 (R115H)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 1276991	NM_005018.3(PDCD1):c.77-180G>C	PDCD1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1286750	NM_005018.3(PDCD1):c.77-218T>C	PDCD1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1252837	NM_005018.3(PDCD1):c.77-287del	PDCD1	Deletion (intron variant)	not provided	GBenign
Select item 150570	GRCh38/hg38 2q37.3(chr2:241856400-242027723)x1	FAM240C, LINC01237 +5 more	Copy number loss	See cases	GBenign
Select item 1234595	NM_005018.3(PDCD1):c.76+241_76+242insTTTGGGCAGGTGACTGCCCAAAG	PDCD1	Insertion (intron variant)	not provided	GBenign
Select item 1258165	NM_005018.3(PDCD1):c.76+126G>C	PDCD1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 1177788	NM_005018.3(PDCD1):c.76+15C>T	PDCD1	Single nucleotide variant (intron variant)	not specified +1 more	GBenign
Select item 790522	NM_005018.3(PDCD1):c.76+10G>A	PDCD1	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 2243463	NM_005018.3(PDCD1):c.38C>T (p.Ala13Val)	PDCD1 (A13V)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2372384	NM_005018.3(PDCD1):c.31G>A (p.Val11Ile)	PDCD1 (V11I)	Single nucleotide variant (missense variant)	not specified	GUncertain significance
Select item 2671587	Single allele	CHRND, LRRFIP1 +123 more	Duplication	not provided	GPathogenic
Select item 2425085	NC_000002.11:g.(?_236403331)_(242801596_?)del	ACKR3, AGAP1 +59 more	Deletion	Bethlem myopathy 1A	GPathogenic
Select item 1711534	GRCh37/hg19 2q37.3(chr2:239229304-243199373)x1	AQP12A, AGXT +39 more	Copy number loss	not provided	GPathogenic
Select item 1703543	GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373)	ABCA12, ABCB11 +1216 more	Copy number gain	Mosaic trisomy 2	GPathogenic
Select item 1411455	NC_000002.11:g.(?_238233417)_(242801596_?)del	AGXT, ANKMY1 +53 more	Deletion	D-2-hydroxyglutaric aciduria 1	GPathogenic
Select item 1411130	NC_000002.11:g.(?_238233417)_(242800990_?)dup	AGXT, ANKMY1 +53 more	Duplication	Hereditary spastic paraplegia 30 +3 more	GUncertain significance
Select item 1371785	NC_000002.11:g.(?_236403331)_(242801596_?)dup	ACKR3, AGAP1 +59 more	Duplication	not provided	GUncertain significance
Select item 1340021	GRCh37/hg19 2q37.3(chr2:240208466-243199373)x3	LOC100128563, MAB21L4 +37 more	Copy number gain	not provided	GUncertain significance
Select item 997810	Single allele	D2HGDH, DTYMK +57 more	Deletion	Intellectual disability	GPathogenic
Select item 983184	GRCh37/hg19 2q31.2-37.3(chr2:178397959-243007457)x3	AAMP, ABCA12 +384 more	Copy number gain	See cases	GPathogenic
Select item 981208	GRCh37/hg19 2q37.1-37.3(chr2:233110452-243028452)x1	KCNJ13, NGEF +97 more	Copy number loss	Chromosome 2q37 deletion syndrome	GPathogenic
Select item 929402	GRCh37/hg19 2q37.3(chr2:241791028-242842568)x3	AGXT, ANO7 +19 more	Copy number gain	See cases	GUncertain significance
Select item 929352	GRCh37/hg19 2q37.3(chr2:241810850-243048760)x3	AGXT, ANO7 +19 more	Copy number gain	See cases	GUncertain significance
Select item 929330	GRCh37/hg19 2q37.3(chr2:238863455-243048760)x3	AGXT, ANKMY1 +48 more	Copy number gain	See cases	GUncertain significance
Select item 814382	GRCh37/hg19 2q37.3(chr2:242011633-243199373)x1	ANO7, THAP4 +17 more	Copy number loss	not provided	GLikely pathogenic
Select item 638101	GRCh37/hg19 2q37.3(chr2:239894072-243048760)x1	AGXT, ANKMY1 +37 more	Copy number loss	See cases	GPathogenic
Select item 625781	GRCh37/hg19 2q37.3(chr2:239071623-243048760)	AGXT, ANKMY1 +44 more	Copy number loss	Chromosome 2q37 deletion syndrome	GPathogenic
Select item 625780	GRCh37/hg19 2q37.3(chr2:238795602-242918203)	AGXT, ANKMY1 +49 more	Copy number loss	Chromosome 2q37 deletion syndrome	GLikely pathogenic
Select item 624557	GRCh37/hg19 2q37.3(chr2:242766297-242886445)x3	PDCD1, RTP5	Copy number gain	not provided	GUncertain significance
Select item 395404	GRCh37/hg19 2q37.1-37.3(chr2:233784243-243040217)x1	ACKR3, AGAP1 +82 more	Copy number loss	See cases	GPathogenic
Select item 394636	GRCh37/hg19 2q37.3(chr2:242045569-243040217)x1	ANO7, ATG4B +15 more	Copy number loss	See cases	GLikely pathogenic
Select item 187820	GRCh37/hg19 2q37.3(chr2:239873381-243006013)x3	D2HGDH, DTYMK +36 more	Copy number gain	See cases	GPathogenic

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Items: 93