| | | Single nucleotide variant (splice acceptor variant) | Coffin-Lowry syndrome | |
| | LOC130068032, RPS6KA3 (S17N) | Single nucleotide variant (missense variant) | RPS6KA3-related condition | |
| | LOC130068032, RPS6KA3 (S19C) | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | LOC130068032, RPS6KA3 (L3V) | Single nucleotide variant (missense variant) | Inborn genetic diseases | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (synonymous variant) | Coffin-Lowry syndrome +1 more | |
| | LOC130068032, RPS6KA3 (P2T) | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | Intellectual disability, X-linked 19 +1 more | |
| | LOC130068032, RPS6KA3 (L6P) | Single nucleotide variant (missense variant) | Coffin-Lowry syndrome +2 more | GConflicting classifications of pathogenicity |
| | | Copy number gain | not specified | |
| | LOC130068032, RPS6KA3 (A7G) | Single nucleotide variant (missense variant) | Coffin-Lowry syndrome +1 more | |
| | | Copy number gain | not provided | |
| | | Deletion (frameshift variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | LOC130068032, RPS6KA3 (E16D) | Single nucleotide variant (missense variant) | Coffin-Lowry syndrome +2 more | GConflicting classifications of pathogenicity |
| | LOC130068032, RPS6KA3 (S21I) | Single nucleotide variant (missense variant) | Intellectual disability, X-linked 19 +3 more | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | Coffin-Lowry syndrome | |
| | | Single nucleotide variant (intron variant) | Intellectual disability, X-linked 19 | |
| | | Duplication (intron variant) | Intellectual disability, X-linked 19 | |
| | | Copy number gain | not provided | |
| | | Deletion (frameshift variant) | Coffin-Lowry syndrome | |
| | | Single nucleotide variant (missense variant) | Coffin-Lowry syndrome | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Duplication | Coffin-Lowry syndrome | |
| | | Insertion | Coffin-Lowry syndrome | |
| | | Deletion | Coffin-Lowry syndrome | |