virus

download a coronavirus dataset

Name

datasets download virus - download a coronavirus dataset

Description

Download a coronavirus genome or SARS-CoV-2 protein dataset as a zip file.

Refer to NCBI’s command line quickstart documentation for information about getting started with the command-line tools.

Examples

  datasets download virus genome taxon sars-cov-2 --host dog
  datasets download virus protein S --host dog --filename SARS2-spike-dog.zip

Options

      --api-key string    NCBI Datasets API Key
      --filename string   specify a custom file name for the downloaded dataset (default "ncbi_dataset.zip")
  -h, --help              help for virus
      --no-progressbar    hide progress bar

Commands


genome

download a coronavirus genome dataset by taxon

protein

download a SARS-CoV-2 protein dataset by protein name

Generated October 22, 2021