Datasets Documentation

These documentation pages describe how to use NCBI Datasets websites and tools. We love user feedback! Please reach out to us using the yellow Feedback button in the lower right hand corner.

Getting started

See how NCBI Datasets can help you gather genomic data from a variety of NCBI tools and platforms

Command line tools

Step-by-step instructions on downloading and installing NCBI Datasets command-line tools

How-to guides

Use NCBI Datasets to gather metadata, download data packages, view reports and more

Programming languages

NCBI Datasets Python and R resources

Reference

Additional information about the NCBI Datasets CLI and API, file formats and data packages

FAQs and troubleshooting

FAQs, known issue resolutions and helpful resources