nstd199 (Quan et al. 2021)

Organism:
Human
Study Type:
Collection
Submitter:
Cheng Quan
Description:
Structural variation (SV) acts as an essential mutational force shaping the evolution and function of the human genome. To investigate the role of SVs in high-altitude adaptation (HAA), we here generated a comprehensive catalog of SVs in a Chinese Tibetan (n = 15) and Han (n = 10) population using the nanopore sequencing technology. Among a total of 38,216 unique SVs in the catalog, 27% were sequence-resolved for the first time. See Variant Summary counts for nstd199 in dbVar Variant Summary.
Project:
PRJNA681146
Publication(s):
Quan et al. 2021

Detailed Information: Download 38027 Variant Regions, Download 38028 Variant Calls, Download Both, FTP

Variant Summary

Assembly used for analysis:
Remapped: GRCh38.p13 (hg38)
Submitted: GRCh37 (hg19)

Sequence IDChrNumber of Variant RegionsNumber of Variant CallsPlacement typeLink to graphical display
NC_000001.11Chr12,7232,724RemappedNC_000001.11
NC_000002.12Chr22,8912,891RemappedNC_000002.12
NC_000003.12Chr32,2272,227RemappedNC_000003.12
NC_000004.12Chr42,4932,493RemappedNC_000004.12
NC_000005.10Chr52,1202,120RemappedNC_000005.10
NC_000006.12Chr62,1462,146RemappedNC_000006.12
NC_000007.14Chr72,3532,353RemappedNC_000007.14
NC_000008.11Chr81,8571,857RemappedNC_000008.11
NC_000009.12Chr91,5341,534RemappedNC_000009.12
NC_000010.11Chr101,8411,841RemappedNC_000010.11
NC_000011.10Chr111,7421,742RemappedNC_000011.10
NC_000012.12Chr121,8191,819RemappedNC_000012.12
NC_000013.11Chr131,3421,342RemappedNC_000013.11
NC_000014.9Chr141,1621,162RemappedNC_000014.9
NC_000015.10Chr151,0491,049RemappedNC_000015.10
NC_000016.10Chr161,2861,286RemappedNC_000016.10
NC_000017.11Chr171,3461,346RemappedNC_000017.11
NC_000018.10Chr181,0581,058RemappedNC_000018.10
NC_000019.10Chr191,3521,352RemappedNC_000019.10
NC_000020.11Chr20993993RemappedNC_000020.11
NC_000021.9Chr21661661RemappedNC_000021.9
NC_000022.11Chr22706706RemappedNC_000022.11
NC_000023.11ChrX1,1321,132RemappedNC_000023.11
NT_187514.1Chr1|NT_187514.144RemappedNT_187514.1
NT_187515.1Chr1|NT_187515.177RemappedNT_187515.1
NT_187516.1Chr1|NT_187516.11313RemappedNT_187516.1
NT_187518.1Chr1|NT_187518.188RemappedNT_187518.1
NT_187519.1Chr1|NT_187519.188RemappedNT_187519.1
NT_187521.1Chr1|NT_187521.111RemappedNT_187521.1
NT_187646.1Chr1|NT_187646.188RemappedNT_187646.1
NW_003315907.2Chr1|NW_003315907.244RemappedNW_003315907.2
NW_009646194.1Chr1|NW_009646194.133RemappedNW_009646194.1
NW_011332687.1Chr1|NW_011332687.144RemappedNW_011332687.1
NW_011332688.1Chr1|NW_011332688.199RemappedNW_011332688.1
NW_012132914.1Chr1|NW_012132914.111RemappedNW_012132914.1
NW_014040925.1Chr1|NW_014040925.122RemappedNW_014040925.1
NW_014040926.1Chr1|NW_014040926.122RemappedNW_014040926.1
NW_014040927.1Chr1|NW_014040927.133RemappedNW_014040927.1
NW_017852928.1Chr1|NW_017852928.199RemappedNW_017852928.1
NW_018654706.1Chr1|NW_018654706.122RemappedNW_018654706.1
NW_018654707.1Chr1|NW_018654707.122RemappedNW_018654707.1
NW_018654708.1Chr1|NW_018654708.111RemappedNW_018654708.1
NW_019805487.1Chr1|NW_019805487.122RemappedNW_019805487.1
NT_187522.1Chr2|NT_187522.144RemappedNT_187522.1
NT_187523.1Chr2|NT_187523.11616RemappedNT_187523.1
NT_187524.1Chr2|NT_187524.122RemappedNT_187524.1
NT_187525.1Chr2|NT_187525.177RemappedNT_187525.1
NT_187526.1Chr2|NT_187526.166RemappedNT_187526.1
NT_187527.1Chr2|NT_187527.12222RemappedNT_187527.1
NT_187528.1Chr2|NT_187528.122RemappedNT_187528.1
NT_187529.1Chr2|NT_187529.12828RemappedNT_187529.1
NT_187530.1Chr2|NT_187530.111RemappedNT_187530.1
NT_187531.1Chr2|NT_187531.111RemappedNT_187531.1
NT_187647.1Chr2|NT_187647.11616RemappedNT_187647.1
NW_003315908.1Chr2|NW_003315908.111RemappedNW_003315908.1
NW_003315909.1Chr2|NW_003315909.122RemappedNW_003315909.1
NW_011332689.1Chr2|NW_011332689.188RemappedNW_011332689.1
NW_011332690.1Chr2|NW_011332690.11010RemappedNW_011332690.1
NW_012132915.1Chr2|NW_012132915.11414RemappedNW_012132915.1
NW_015495299.1Chr2|NW_015495299.199RemappedNW_015495299.1
NW_018654709.1Chr2|NW_018654709.133RemappedNW_018654709.1
NW_018654710.1Chr2|NW_018654710.133RemappedNW_018654710.1
NT_187678.1Chr3|NT_187678.12424RemappedNT_187678.1
NT_187688.1Chr3|NT_187688.12323RemappedNT_187688.1
NT_187689.1Chr3|NT_187689.12727RemappedNT_187689.1
NT_187690.1Chr3|NT_187690.12424RemappedNT_187690.1
NT_187691.1Chr3|NT_187691.12424RemappedNT_187691.1
NT_187532.1Chr3|NT_187532.12222RemappedNT_187532.1
NT_187533.1Chr3|NT_187533.122RemappedNT_187533.1
NT_187534.1Chr3|NT_187534.155RemappedNT_187534.1
NT_187535.1Chr3|NT_187535.122RemappedNT_187535.1
NT_187536.1Chr3|NT_187536.133RemappedNT_187536.1
NT_187537.1Chr3|NT_187537.144RemappedNT_187537.1
NT_187538.1Chr3|NT_187538.122RemappedNT_187538.1
NT_187539.1Chr3|NT_187539.166RemappedNT_187539.1
NT_187649.1Chr3|NT_187649.12323RemappedNT_187649.1
NW_003315913.1Chr3|NW_003315913.111RemappedNW_003315913.1
NW_003871060.2Chr3|NW_003871060.233RemappedNW_003871060.2
NW_009646197.1Chr3|NW_009646197.122RemappedNW_009646197.1
NW_011332691.1Chr3|NW_011332691.155RemappedNW_011332691.1
NW_012132916.1Chr3|NW_012132916.144RemappedNW_012132916.1
NW_017363813.1Chr3|NW_017363813.155RemappedNW_017363813.1
NW_018654711.1Chr3|NW_018654711.122RemappedNW_018654711.1
NW_019805488.1Chr3|NW_019805488.122RemappedNW_019805488.1
NW_019805489.1Chr3|NW_019805489.144RemappedNW_019805489.1
NW_019805490.1Chr3|NW_019805490.133RemappedNW_019805490.1
NW_019805491.1Chr3|NW_019805491.111RemappedNW_019805491.1
NW_019805492.1Chr3|NW_019805492.111RemappedNW_019805492.1
NT_187679.1Chr4|NT_187679.13535RemappedNT_187679.1
NT_187540.1Chr4|NT_187540.155RemappedNT_187540.1
NT_187541.1Chr4|NT_187541.133RemappedNT_187541.1
NT_187542.1Chr4|NT_187542.177RemappedNT_187542.1
NT_187543.1Chr4|NT_187543.11717RemappedNT_187543.1
NT_187544.1Chr4|NT_187544.122RemappedNT_187544.1
NT_187545.1Chr4|NT_187545.11212RemappedNT_187545.1
NT_187650.1Chr4|NT_187650.11818RemappedNT_187650.1
NW_003315915.1Chr4|NW_003315915.133RemappedNW_003315915.1
NW_013171799.1Chr4|NW_013171799.133RemappedNW_013171799.1
NW_013171800.1Chr4|NW_013171800.133RemappedNW_013171800.1
NW_013171801.1Chr4|NW_013171801.122RemappedNW_013171801.1
NW_017363814.1Chr4|NW_017363814.133RemappedNW_017363814.1
NT_187546.1Chr5|NT_187546.166RemappedNT_187546.1
NT_187547.1Chr5|NT_187547.11212RemappedNT_187547.1
NT_187548.1Chr5|NT_187548.11818RemappedNT_187548.1
NT_187549.1Chr5|NT_187549.122RemappedNT_187549.1
NT_187550.1Chr5|NT_187550.11515RemappedNT_187550.1
NT_187551.1Chr5|NT_187551.122RemappedNT_187551.1
NT_187651.1Chr5|NT_187651.133RemappedNT_187651.1
NT_187652.1Chr5|NT_187652.166RemappedNT_187652.1
NW_003315917.2Chr5|NW_003315917.299RemappedNW_003315917.2
NW_003315919.1Chr5|NW_003315919.122RemappedNW_003315919.1
NW_003315920.1Chr5|NW_003315920.144RemappedNW_003315920.1
NW_009646199.1Chr5|NW_009646199.133RemappedNW_009646199.1
NW_016107297.1Chr5|NW_016107297.144RemappedNW_016107297.1
NW_016107298.1Chr5|NW_016107298.12222RemappedNW_016107298.1
NW_018654712.1Chr5|NW_018654712.122RemappedNW_018654712.1
NT_187552.1Chr6|NT_187552.166RemappedNT_187552.1
NT_187553.1Chr6|NT_187553.11919RemappedNT_187553.1
NT_187555.1Chr6|NT_187555.144RemappedNT_187555.1
NT_187556.1Chr6|NT_187556.144RemappedNT_187556.1
NT_187557.1Chr6|NT_187557.111RemappedNT_187557.1
NW_004166862.2Chr6|NW_004166862.21515RemappedNW_004166862.2
NW_009646200.1Chr6|NW_009646200.11111RemappedNW_009646200.1
NW_012132918.1Chr6|NW_012132918.144RemappedNW_012132918.1
NW_013171802.1Chr6|NW_013171802.122RemappedNW_013171802.1
NW_017363815.1Chr6|NW_017363815.111RemappedNW_017363815.1
NW_018654713.1Chr6|NW_018654713.133RemappedNW_018654713.1
NT_187558.1Chr7|NT_187558.11212RemappedNT_187558.1
NT_187559.1Chr7|NT_187559.155RemappedNT_187559.1
NT_187560.1Chr7|NT_187560.12828RemappedNT_187560.1
NT_187561.1Chr7|NT_187561.133RemappedNT_187561.1
NT_187563.1Chr7|NT_187563.11212RemappedNT_187563.1
NT_187564.1Chr7|NT_187564.166RemappedNT_187564.1
NW_003315922.2Chr7|NW_003315922.222RemappedNW_003315922.2
NW_012132919.1Chr7|NW_012132919.144RemappedNW_012132919.1
NW_017852929.1Chr7|NW_017852929.133RemappedNW_017852929.1
NW_017852930.1Chr7|NW_017852930.133RemappedNW_017852930.1
NW_018654714.1Chr7|NW_018654714.133RemappedNW_018654714.1
NW_018654715.1Chr7|NW_018654715.155RemappedNW_018654715.1
NW_019805493.1Chr7|NW_019805493.111RemappedNW_019805493.1
NT_187680.1Chr8|NT_187680.11515RemappedNT_187680.1
NT_187565.1Chr8|NT_187565.14545RemappedNT_187565.1
NT_187566.1Chr8|NT_187566.111RemappedNT_187566.1
NT_187567.1Chr8|NT_187567.155RemappedNT_187567.1
NT_187568.1Chr8|NT_187568.13939RemappedNT_187568.1
NT_187569.1Chr8|NT_187569.155RemappedNT_187569.1
NT_187570.1Chr8|NT_187570.111RemappedNT_187570.1
NT_187571.1Chr8|NT_187571.11010RemappedNT_187571.1
NT_187572.1Chr8|NT_187572.199RemappedNT_187572.1
NT_187573.1Chr8|NT_187573.199RemappedNT_187573.1
NT_187574.1Chr8|NT_187574.155RemappedNT_187574.1
NT_187577.1Chr8|NT_187577.144RemappedNT_187577.1
NT_187654.1Chr8|NT_187654.13030RemappedNT_187654.1
NT_187655.1Chr8|NT_187655.11818RemappedNT_187655.1
NW_017852931.1Chr8|NW_017852931.111RemappedNW_017852931.1
NW_017852932.1Chr8|NW_017852932.122RemappedNW_017852932.1
NW_018654716.1Chr8|NW_018654716.11111RemappedNW_018654716.1
NW_018654717.1Chr8|NW_018654717.15555RemappedNW_018654717.1
NW_019805494.1Chr8|NW_019805494.111RemappedNW_019805494.1
NT_187578.1Chr9|NT_187578.133RemappedNT_187578.1
NW_003315930.1Chr9|NW_003315930.111RemappedNW_003315930.1
NW_009646201.1Chr9|NW_009646201.199RemappedNW_009646201.1
NW_013171804.1Chr9|NW_013171804.122RemappedNW_013171804.1
NW_013171805.1Chr9|NW_013171805.122RemappedNW_013171805.1
NT_187579.1Chr10|NT_187579.133RemappedNT_187579.1
NW_003315934.1Chr10|NW_003315934.188RemappedNW_003315934.1
NW_009646202.1Chr10|NW_009646202.133RemappedNW_009646202.1
NW_013171806.1Chr10|NW_013171806.144RemappedNW_013171806.1
NW_013171807.1Chr10|NW_013171807.122RemappedNW_013171807.1
NT_187681.1Chr11|NT_187681.11212RemappedNT_187681.1
NT_187656.1Chr11|NT_187656.133RemappedNT_187656.1
NT_187657.1Chr11|NT_187657.11010RemappedNT_187657.1
NT_187581.1Chr11|NT_187581.11010RemappedNT_187581.1
NT_187582.1Chr11|NT_187582.122RemappedNT_187582.1
NT_187583.1Chr11|NT_187583.122RemappedNT_187583.1
NT_187584.1Chr11|NT_187584.11616RemappedNT_187584.1
NT_187585.1Chr11|NT_187585.166RemappedNT_187585.1
NT_187586.1Chr11|NT_187586.11515RemappedNT_187586.1
NW_003315936.1Chr11|NW_003315936.111RemappedNW_003315936.1
NW_003871073.1Chr11|NW_003871073.133RemappedNW_003871073.1
NW_003871074.1Chr11|NW_003871074.111RemappedNW_003871074.1
NW_009646203.1Chr11|NW_009646203.111RemappedNW_009646203.1
NW_011332695.1Chr11|NW_011332695.122RemappedNW_011332695.1
NW_013171808.1Chr11|NW_013171808.133RemappedNW_013171808.1
NW_015148966.1Chr11|NW_015148966.199RemappedNW_015148966.1
NW_019805495.1Chr11|NW_019805495.144RemappedNW_019805495.1
NW_019805496.1Chr11|NW_019805496.111RemappedNW_019805496.1
NW_019805497.1Chr11|NW_019805497.155RemappedNW_019805497.1
NW_019805498.1Chr11|NW_019805498.111RemappedNW_019805498.1
NT_187658.1Chr12|NT_187658.11313RemappedNT_187658.1
NT_187587.1Chr12|NT_187587.166RemappedNT_187587.1
NT_187588.1Chr12|NT_187588.122RemappedNT_187588.1
NT_187590.1Chr12|NT_187590.133RemappedNT_187590.1
NT_187591.1Chr12|NT_187591.122RemappedNT_187591.1
NW_003315938.1Chr12|NW_003315938.111RemappedNW_003315938.1
NW_003315939.2Chr12|NW_003315939.233RemappedNW_003315939.2
NW_003315940.1Chr12|NW_003315940.144RemappedNW_003315940.1
NW_003315941.1Chr12|NW_003315941.166RemappedNW_003315941.1
NW_003571050.1Chr12|NW_003571050.11313RemappedNW_003571050.1
NW_009646204.1Chr12|NW_009646204.133RemappedNW_009646204.1
NW_011332696.1Chr12|NW_011332696.177RemappedNW_011332696.1
NW_011332697.1Chr12|NW_011332697.111RemappedNW_011332697.1
NW_013171809.1Chr12|NW_013171809.177RemappedNW_013171809.1
NW_015148967.1Chr12|NW_015148967.133RemappedNW_015148967.1
NW_018654718.1Chr12|NW_018654718.11919RemappedNW_018654718.1
NW_018654719.1Chr12|NW_018654719.122RemappedNW_018654719.1
NW_018654720.1Chr12|NW_018654720.133RemappedNW_018654720.1
NW_019805499.1Chr12|NW_019805499.155RemappedNW_019805499.1
NT_187592.1Chr13|NT_187592.11010RemappedNT_187592.1
NT_187595.1Chr13|NT_187595.133RemappedNT_187595.1
NT_187596.1Chr13|NT_187596.188RemappedNT_187596.1
NT_187597.1Chr13|NT_187597.111RemappedNT_187597.1
NW_009646205.1Chr13|NW_009646205.133RemappedNW_009646205.1
NW_011332699.1Chr13|NW_011332699.155RemappedNW_011332699.1
NW_011332700.1Chr13|NW_011332700.133RemappedNW_011332700.1
NW_013171810.1Chr13|NW_013171810.122RemappedNW_013171810.1
NW_013171811.1Chr13|NW_013171811.144RemappedNW_013171811.1
NT_187598.1Chr14|NT_187598.155RemappedNT_187598.1
NT_187599.1Chr14|NT_187599.155RemappedNT_187599.1
NT_187601.1Chr14|NT_187601.11919RemappedNT_187601.1
NW_018654721.1Chr14|NW_018654721.111RemappedNW_018654721.1
NW_018654722.1Chr14|NW_018654722.11919RemappedNW_018654722.1
NT_187659.1Chr15|NT_187659.144RemappedNT_187659.1
NT_187660.1Chr15|NT_187660.13131RemappedNT_187660.1
NT_187602.1Chr15|NT_187602.111RemappedNT_187602.1
NT_187604.1Chr15|NT_187604.122RemappedNT_187604.1
NT_187606.1Chr15|NT_187606.122RemappedNT_187606.1
NW_003315944.2Chr15|NW_003315944.244RemappedNW_003315944.2
NW_012132920.1Chr15|NW_012132920.122RemappedNW_012132920.1
NT_187607.1Chr16|NT_187607.11818RemappedNT_187607.1
NT_187609.1Chr16|NT_187609.122RemappedNT_187609.1
NT_187610.1Chr16|NT_187610.199RemappedNT_187610.1
NW_003315945.1Chr16|NW_003315945.144RemappedNW_003315945.1
NW_003315946.1Chr16|NW_003315946.133RemappedNW_003315946.1
NW_012132921.1Chr16|NW_012132921.133RemappedNW_012132921.1
NW_013171812.1Chr16|NW_013171812.122RemappedNW_013171812.1
NW_013171813.1Chr16|NW_013171813.133RemappedNW_013171813.1
NW_017852933.1Chr16|NW_017852933.188RemappedNW_017852933.1
NW_018654723.1Chr16|NW_018654723.111RemappedNW_018654723.1
NW_019805500.1Chr16|NW_019805500.177RemappedNW_019805500.1
NT_187662.1Chr17|NT_187662.11919RemappedNT_187662.1
NT_187663.1Chr17|NT_187663.133RemappedNT_187663.1
NT_187664.1Chr17|NT_187664.11919RemappedNT_187664.1
NW_003871093.1Chr17|NW_003871093.122RemappedNW_003871093.1
NT_187611.1Chr17|NT_187611.11313RemappedNT_187611.1
NT_187612.1Chr17|NT_187612.12626RemappedNT_187612.1
NT_187613.1Chr17|NT_187613.12929RemappedNT_187613.1
NT_187615.1Chr17|NT_187615.177RemappedNT_187615.1
NT_187616.1Chr17|NT_187616.111RemappedNT_187616.1
NW_003315952.3Chr17|NW_003315952.33131RemappedNW_003315952.3
NW_003315954.1Chr17|NW_003315954.155RemappedNW_003315954.1
NW_003315955.1Chr17|NW_003315955.133RemappedNW_003315955.1
NW_003871091.1Chr17|NW_003871091.11616RemappedNW_003871091.1
NW_003871092.1Chr17|NW_003871092.122RemappedNW_003871092.1
NW_016107299.1Chr17|NW_016107299.111RemappedNW_016107299.1
NW_017363817.1Chr17|NW_017363817.13131RemappedNW_017363817.1
NW_017363818.1Chr17|NW_017363818.111RemappedNW_017363818.1
NW_017363819.1Chr17|NW_017363819.155RemappedNW_017363819.1
NW_019805501.1Chr17|NW_019805501.111RemappedNW_019805501.1
NT_187665.1Chr18|NT_187665.11515RemappedNT_187665.1
NT_187666.1Chr18|NT_187666.199RemappedNT_187666.1
NT_187617.1Chr18|NT_187617.11111RemappedNT_187617.1
NT_187618.1Chr18|NT_187618.122RemappedNT_187618.1
NW_003315956.1Chr18|NW_003315956.144RemappedNW_003315956.1
NW_003315958.1Chr18|NW_003315958.11212RemappedNW_003315958.1
NW_003315959.1Chr18|NW_003315959.144RemappedNW_003315959.1
NW_003315960.1Chr18|NW_003315960.111RemappedNW_003315960.1
NW_003315961.1Chr18|NW_003315961.199RemappedNW_003315961.1
NW_013171814.1Chr18|NW_013171814.177RemappedNW_013171814.1
NW_014040928.1Chr18|NW_014040928.122RemappedNW_014040928.1
NW_018654724.1Chr18|NW_018654724.133RemappedNW_018654724.1
NW_019805503.1Chr18|NW_019805503.177RemappedNW_019805503.1
NW_003571061.2Chr19|NW_003571061.23333RemappedNW_003571061.2
NW_003571057.2Chr19|NW_003571057.22626RemappedNW_003571057.2
NW_003571058.2Chr19|NW_003571058.22626RemappedNW_003571058.2
NW_003571059.2Chr19|NW_003571059.22626RemappedNW_003571059.2
NW_003571060.1Chr19|NW_003571060.14141RemappedNW_003571060.1
NW_003571056.2Chr19|NW_003571056.22626RemappedNW_003571056.2
NW_003571055.2Chr19|NW_003571055.23232RemappedNW_003571055.2
NT_187619.1Chr19|NT_187619.122RemappedNT_187619.1
NT_187620.1Chr19|NT_187620.111RemappedNT_187620.1
NT_187621.1Chr19|NT_187621.133RemappedNT_187621.1
NT_187622.1Chr19|NT_187622.11313RemappedNT_187622.1
NW_003315962.1Chr19|NW_003315962.188RemappedNW_003315962.1
NW_003315963.1Chr19|NW_003315963.122RemappedNW_003315963.1
NW_003315964.2Chr19|NW_003315964.255RemappedNW_003315964.2
NW_003315965.1Chr19|NW_003315965.144RemappedNW_003315965.1
NW_003571054.1Chr19|NW_003571054.13838RemappedNW_003571054.1
NW_014040929.1Chr19|NW_014040929.11111RemappedNW_014040929.1
NT_187623.1Chr20|NT_187623.177RemappedNT_187623.1
NT_187624.1Chr20|NT_187624.11818RemappedNT_187624.1
NT_187625.1Chr20|NT_187625.177RemappedNT_187625.1
NW_003315966.2Chr20|NW_003315966.222RemappedNW_003315966.2
NT_187626.1Chr21|NT_187626.166RemappedNT_187626.1
NT_187627.1Chr21|NT_187627.122RemappedNT_187627.1
NT_187628.1Chr21|NT_187628.144RemappedNT_187628.1
NW_003315967.2Chr21|NW_003315967.211RemappedNW_003315967.2
NW_003315968.2Chr21|NW_003315968.244RemappedNW_003315968.2
NW_003315969.2Chr21|NW_003315969.211RemappedNW_003315969.2
NW_015148969.1Chr22|NW_015148969.155RemappedNW_015148969.1
NT_187629.1Chr22|NT_187629.155RemappedNT_187629.1
NT_187630.1Chr22|NT_187630.111RemappedNT_187630.1
NT_187631.1Chr22|NT_187631.144RemappedNT_187631.1
NT_187632.1Chr22|NT_187632.199RemappedNT_187632.1
NW_003315972.2Chr22|NW_003315972.222RemappedNW_003315972.2
NT_187667.1ChrX|NT_187667.111RemappedNT_187667.1
NW_017363820.1ChrX|NW_017363820.133RemappedNW_017363820.1
NT_187634.1ChrX|NT_187634.111RemappedNT_187634.1
NT_187635.1ChrX|NT_187635.122RemappedNT_187635.1
NW_009646195.1Chr1|NW_009646195.122RemappedNW_009646195.1
NT_113793.3Chr4|NT_113793.322RemappedNT_113793.3
NT_187562.1Chr7|NT_187562.12222RemappedNT_187562.1
NT_187653.1Chr7|NT_187653.11313RemappedNT_187653.1
NT_187576.1Chr8|NT_187576.15858RemappedNT_187576.1
NW_003571049.1Chr12|NW_003571049.144RemappedNW_003571049.1
NT_187593.1Chr13|NT_187593.122RemappedNT_187593.1
NT_187594.1Chr13|NT_187594.166RemappedNT_187594.1
NW_011332698.1Chr13|NW_011332698.13333RemappedNW_011332698.1
NT_187600.1Chr14|NT_187600.16363RemappedNT_187600.1
NT_187603.1Chr15|NT_187603.188RemappedNT_187603.1
NW_011332701.1Chr15|NW_011332701.13535RemappedNW_011332701.1
NT_187661.1Chr17|NT_187661.122RemappedNT_187661.1
NT_187614.1Chr17|NT_187614.13636RemappedNT_187614.1
NT_187693.1Chr19|NT_187693.15252RemappedNT_187693.1
NW_009646206.1Chr19|NW_009646206.166RemappedNW_009646206.1
NT_187633.1Chr22|NT_187633.177RemappedNT_187633.1
Sequence IDChrNumber of Variant RegionsNumber of Variant CallsPlacement typeLink to graphical display
NC_000001.10Chr12,7382,739SubmittedNC_000001.10
NC_000002.11Chr22,9162,916SubmittedNC_000002.11
NC_000003.11Chr32,2282,228SubmittedNC_000003.11
NC_000004.11Chr42,4962,496SubmittedNC_000004.11
NC_000005.9Chr52,1232,123SubmittedNC_000005.9
NC_000006.11Chr62,1512,151SubmittedNC_000006.11
NC_000007.13Chr72,3752,375SubmittedNC_000007.13
NC_000008.10Chr81,8721,872SubmittedNC_000008.10
NC_000009.11Chr91,5361,536SubmittedNC_000009.11
NC_000010.10Chr101,8471,847SubmittedNC_000010.10
NC_000011.9Chr111,7501,750SubmittedNC_000011.9
NC_000012.11Chr121,8261,826SubmittedNC_000012.11
NC_000013.10Chr131,3461,346SubmittedNC_000013.10
NC_000014.8Chr141,1731,173SubmittedNC_000014.8
NC_000015.9Chr151,0511,051SubmittedNC_000015.9
NC_000016.9Chr161,2911,291SubmittedNC_000016.9
NC_000017.10Chr171,3601,360SubmittedNC_000017.10
NC_000018.9Chr181,0601,060SubmittedNC_000018.9
NC_000019.9Chr191,3701,370SubmittedNC_000019.9
NC_000020.10Chr20996996SubmittedNC_000020.10
NC_000021.8Chr21663663SubmittedNC_000021.8
NC_000022.10Chr22709709SubmittedNC_000022.10
NC_000023.10ChrX1,1501,150SubmittedNC_000023.10

Variant Region remap statusVariant Call remap status
Sequence IDChrVariant Regions on sourcePerfectGoodPassFailMultVariant Calls on sourcePerfectGoodPassFailMult
NC_000001.10Chr12,7382,600162015872,7392,60116201587
NC_000002.11Chr22,9162,742119181362,9162,74211918136
NC_000003.11Chr32,2282,141201842,2282,14120184
NC_000004.11Chr42,4962,401723832,4962,40172383
NC_000005.9Chr52,1232,0200031002,1232,020003100
NC_000006.11Chr62,1512,0632115702,1512,063211570
NC_000007.13Chr72,3752,241712141012,3752,24171214101
NC_000008.10Chr81,8721,5706632871,8721,570663287
NC_000009.11Chr91,5361,507324201,5361,50732420
NC_000010.10Chr101,8471,8052146201,8471,805214620
NC_000011.9Chr111,7501,652716841,7501,65271684
NC_000012.11Chr121,8261,714637961,8261,71463796
NC_000013.10Chr131,3461,273001721,3461,27300172
NC_000014.8Chr141,1731,0444691101,1731,044469110
NC_000015.9Chr151,051981852551,05198185255
NC_000016.9Chr161,2911,220335601,2911,22033560
NC_000017.10Chr171,3601,13071052081,3601,1307105208
NC_000018.9Chr181,060992012651,06099201265
NC_000019.9Chr191,3701,25315101011,3701,2531510101
NC_000020.10Chr209969571043499695710434
NC_000021.8Chr216636352122366363521223
NC_000022.10Chr227096662743070966627430
NC_000023.10ChrX1,1501,0932581861,1501,093258186

Samplesets

Number of Samplesets: 1

Size:
25
Organisms:
Homo sapiens
Sampleset Phenotype(s):
None reported
  • Download Samples as CSV file
  • Samples for sampleset 1
    Sample IDSubject ID EthnicitySubject Phenotype
    SAMN16934186CQ188TibetanNot reported
    SAMN16934179CQ121TibetanNot reported
    SAMN16934197CQ297HanNot reported
    SAMN16934193CQ292HanNot reported
    SAMN16934173CQ082TibetanNot reported
    SAMN16934184CQ144TibetanNot reported
    SAMN16934182CQ136TibetanNot reported
    SAMN16934195CQ295HanNot reported
    SAMN16934192CQ236HanNot reported
    SAMN16934181CQ132TibetanNot reported
    SAMN16934180CQ123TibetanNot reported
    SAMN16934189CQ233HanNot reported
    SAMN16934175CQ091TibetanNot reported
    SAMN16934178CQ115TibetanNot reported
    SAMN16934190CQ234HanNot reported
    SAMN16934174CQ085TibetanNot reported
    SAMN16934183CQ143TibetanNot reported
    SAMN16934194CQ294HanNot reported
    SAMN16934176CQ095TibetanNot reported
    SAMN16934187CQ200TibetanNot reported
    SAMN16934188CQ232HanNot reported
    SAMN16934185CQ152TibetanNot reported
    SAMN16934177CQ104TibetanNot reported
    SAMN16934191CQ235HanNot reported
    SAMN16934196CQ296HanNot reported

    Experimental Details

    Experiment IDTypeMethodAnalysisNumber of Variant Calls
    1DiscoverySequencingSplit read mapping38,028

    Validations

    No validation data were submitted for this study.

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