nstd35 (Kidd et al. 2010)
- Organism:
- Human
- Study Type:
- Control Set
- Submitter:
- Jeff Kidd
- Submitter URL:
- http://hgsv.washington.edu/
- Description:
- Discovery and analysis of sequence insertions not represented in the human genome reference. See Variant Summary counts for nstd35 in dbVar Variant Summary.
- Project:
- PRJNA29893
- Publication(s):
- Kidd et al. 2010
Detailed Information: Download 9825 Variant Regions, Download 9825 Variant Calls, Download Both, FTP
Variant Summary
Assembly used for analysis:
Remapped: GRCh38.p12 (hg38)
Remapped: GRCh37.p13 (hg19)
Submitted: NCBI36 (hg18)
Submitted: NCBI35 (hg17)
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.11 | Chr1 | 891 | 891 | Remapped | NC_000001.11 |
| NC_000002.12 | Chr2 | 725 | 725 | Remapped | NC_000002.12 |
| NC_000003.12 | Chr3 | 583 | 583 | Remapped | NC_000003.12 |
| NC_000004.12 | Chr4 | 483 | 483 | Remapped | NC_000004.12 |
| NC_000005.10 | Chr5 | 400 | 400 | Remapped | NC_000005.10 |
| NC_000006.12 | Chr6 | 703 | 703 | Remapped | NC_000006.12 |
| NC_000007.14 | Chr7 | 482 | 482 | Remapped | NC_000007.14 |
| NC_000008.11 | Chr8 | 444 | 444 | Remapped | NC_000008.11 |
| NC_000009.12 | Chr9 | 405 | 405 | Remapped | NC_000009.12 |
| NC_000010.11 | Chr10 | 452 | 452 | Remapped | NC_000010.11 |
| NC_000011.10 | Chr11 | 435 | 435 | Remapped | NC_000011.10 |
| NC_000012.12 | Chr12 | 453 | 453 | Remapped | NC_000012.12 |
| NC_000013.11 | Chr13 | 268 | 268 | Remapped | NC_000013.11 |
| NC_000014.9 | Chr14 | 235 | 235 | Remapped | NC_000014.9 |
| NC_000015.10 | Chr15 | 279 | 279 | Remapped | NC_000015.10 |
| NC_000016.10 | Chr16 | 241 | 241 | Remapped | NC_000016.10 |
| NC_000017.11 | Chr17 | 270 | 270 | Remapped | NC_000017.11 |
| NC_000018.10 | Chr18 | 236 | 236 | Remapped | NC_000018.10 |
| NC_000019.10 | Chr19 | 200 | 200 | Remapped | NC_000019.10 |
| NC_000020.11 | Chr20 | 245 | 245 | Remapped | NC_000020.11 |
| NC_000021.9 | Chr21 | 122 | 122 | Remapped | NC_000021.9 |
| NC_000022.11 | Chr22 | 152 | 152 | Remapped | NC_000022.11 |
| NC_000023.11 | ChrX | 319 | 319 | Remapped | NC_000023.11 |
| NC_000024.10 | ChrY | 1 | 1 | Remapped | NC_000024.10 |
| NT_167214.1 | Unplaced|NT_167214.1 | 47 | 47 | Remapped | NT_167214.1 |
| NT_167218.1 | Unplaced|NT_167218.1 | 1 | 1 | Remapped | NT_167218.1 |
| NT_187497.1 | Unplaced|NT_187497.1 | 1 | 1 | Remapped | NT_187497.1 |
| NT_032977.10 | Chr1|NT_032977.10 | 9 | 9 | Remapped | NT_032977.10 |
| NT_167186.2 | Chr1|NT_167186.2 | 1 | 1 | Remapped | NT_167186.2 |
| NT_187514.1 | Chr1|NT_187514.1 | 1 | 1 | Remapped | NT_187514.1 |
| NT_187516.1 | Chr1|NT_187516.1 | 10 | 10 | Remapped | NT_187516.1 |
| NT_187518.1 | Chr1|NT_187518.1 | 11 | 11 | Remapped | NT_187518.1 |
| NT_187519.1 | Chr1|NT_187519.1 | 4 | 4 | Remapped | NT_187519.1 |
| NT_187521.1 | Chr1|NT_187521.1 | 4 | 4 | Remapped | NT_187521.1 |
| NT_187646.1 | Chr1|NT_187646.1 | 11 | 11 | Remapped | NT_187646.1 |
| NW_003315905.1 | Chr1|NW_003315905.1 | 1 | 1 | Remapped | NW_003315905.1 |
| NW_003315907.2 | Chr1|NW_003315907.2 | 4 | 4 | Remapped | NW_003315907.2 |
| NW_009646194.1 | Chr1|NW_009646194.1 | 1 | 1 | Remapped | NW_009646194.1 |
| NW_009646196.1 | Chr1|NW_009646196.1 | 2 | 2 | Remapped | NW_009646196.1 |
| NW_011332687.1 | Chr1|NW_011332687.1 | 8 | 8 | Remapped | NW_011332687.1 |
| NW_011332688.1 | Chr1|NW_011332688.1 | 6 | 6 | Remapped | NW_011332688.1 |
| NW_012132914.1 | Chr1|NW_012132914.1 | 1 | 1 | Remapped | NW_012132914.1 |
| NW_014040925.1 | Chr1|NW_014040925.1 | 1 | 1 | Remapped | NW_014040925.1 |
| NW_014040926.1 | Chr1|NW_014040926.1 | 5 | 5 | Remapped | NW_014040926.1 |
| NW_014040927.1 | Chr1|NW_014040927.1 | 3 | 3 | Remapped | NW_014040927.1 |
| NW_017852928.1 | Chr1|NW_017852928.1 | 1 | 1 | Remapped | NW_017852928.1 |
| NW_018654706.1 | Chr1|NW_018654706.1 | 1 | 1 | Remapped | NW_018654706.1 |
| NW_018654707.1 | Chr1|NW_018654707.1 | 3 | 3 | Remapped | NW_018654707.1 |
| NW_019805487.1 | Chr1|NW_019805487.1 | 2 | 2 | Remapped | NW_019805487.1 |
| NT_005334.17 | Chr2|NT_005334.17 | 7 | 7 | Remapped | NT_005334.17 |
| NT_005403.18 | Chr2|NT_005403.18 | 2 | 2 | Remapped | NT_005403.18 |
| NT_022184.16 | Chr2|NT_022184.16 | 1 | 1 | Remapped | NT_022184.16 |
| NT_187522.1 | Chr2|NT_187522.1 | 2 | 2 | Remapped | NT_187522.1 |
| NT_187523.1 | Chr2|NT_187523.1 | 1 | 1 | Remapped | NT_187523.1 |
| NT_187525.1 | Chr2|NT_187525.1 | 5 | 5 | Remapped | NT_187525.1 |
| NT_187526.1 | Chr2|NT_187526.1 | 2 | 2 | Remapped | NT_187526.1 |
| NT_187529.1 | Chr2|NT_187529.1 | 1 | 1 | Remapped | NT_187529.1 |
| NT_187530.1 | Chr2|NT_187530.1 | 2 | 2 | Remapped | NT_187530.1 |
| NT_187531.1 | Chr2|NT_187531.1 | 3 | 3 | Remapped | NT_187531.1 |
| NT_187647.1 | Chr2|NT_187647.1 | 1 | 1 | Remapped | NT_187647.1 |
| NW_003315909.1 | Chr2|NW_003315909.1 | 12 | 12 | Remapped | NW_003315909.1 |
| NW_011332689.1 | Chr2|NW_011332689.1 | 2 | 2 | Remapped | NW_011332689.1 |
| NW_011332690.1 | Chr2|NW_011332690.1 | 9 | 9 | Remapped | NW_011332690.1 |
| NW_015495299.1 | Chr2|NW_015495299.1 | 3 | 3 | Remapped | NW_015495299.1 |
| NW_018654709.1 | Chr2|NW_018654709.1 | 5 | 5 | Remapped | NW_018654709.1 |
| NW_018654710.1 | Chr2|NW_018654710.1 | 3 | 3 | Remapped | NW_018654710.1 |
| NT_005612.17 | Chr3|NT_005612.17 | 1 | 1 | Remapped | NT_005612.17 |
| NT_022517.19 | Chr3|NT_022517.19 | 6 | 6 | Remapped | NT_022517.19 |
| NT_187533.1 | Chr3|NT_187533.1 | 2 | 2 | Remapped | NT_187533.1 |
| NT_187536.1 | Chr3|NT_187536.1 | 1 | 1 | Remapped | NT_187536.1 |
| NT_187538.1 | Chr3|NT_187538.1 | 3 | 3 | Remapped | NT_187538.1 |
| NW_003315913.1 | Chr3|NW_003315913.1 | 9 | 9 | Remapped | NW_003315913.1 |
| NW_003871060.2 | Chr3|NW_003871060.2 | 1 | 1 | Remapped | NW_003871060.2 |
| NW_009646197.1 | Chr3|NW_009646197.1 | 1 | 1 | Remapped | NW_009646197.1 |
| NW_011332691.1 | Chr3|NW_011332691.1 | 2 | 2 | Remapped | NW_011332691.1 |
| NW_012132916.1 | Chr3|NW_012132916.1 | 40 | 40 | Remapped | NW_012132916.1 |
| NW_017363813.1 | Chr3|NW_017363813.1 | 1 | 1 | Remapped | NW_017363813.1 |
| NW_018654711.1 | Chr3|NW_018654711.1 | 8 | 8 | Remapped | NW_018654711.1 |
| NW_019805488.1 | Chr3|NW_019805488.1 | 1 | 1 | Remapped | NW_019805488.1 |
| NW_019805489.1 | Chr3|NW_019805489.1 | 4 | 4 | Remapped | NW_019805489.1 |
| NW_019805490.1 | Chr3|NW_019805490.1 | 2 | 2 | Remapped | NW_019805490.1 |
| NW_019805492.1 | Chr3|NW_019805492.1 | 3 | 3 | Remapped | NW_019805492.1 |
| NT_187679.1 | Chr4|NT_187679.1 | 1 | 1 | Remapped | NT_187679.1 |
| NT_006051.19 | Chr4|NT_006051.19 | 5 | 5 | Remapped | NT_006051.19 |
| NT_006238.12 | Chr4|NT_006238.12 | 1 | 1 | Remapped | NT_006238.12 |
| NT_016354.20 | Chr4|NT_016354.20 | 1 | 1 | Remapped | NT_016354.20 |
| NT_187540.1 | Chr4|NT_187540.1 | 1 | 1 | Remapped | NT_187540.1 |
| NT_187541.1 | Chr4|NT_187541.1 | 5 | 5 | Remapped | NT_187541.1 |
| NT_187542.1 | Chr4|NT_187542.1 | 1 | 1 | Remapped | NT_187542.1 |
| NT_187544.1 | Chr4|NT_187544.1 | 4 | 4 | Remapped | NT_187544.1 |
| NW_003315914.1 | Chr4|NW_003315914.1 | 8 | 8 | Remapped | NW_003315914.1 |
| NW_013171799.1 | Chr4|NW_013171799.1 | 3 | 3 | Remapped | NW_013171799.1 |
| NW_013171800.1 | Chr4|NW_013171800.1 | 1 | 1 | Remapped | NW_013171800.1 |
| NW_013171801.1 | Chr4|NW_013171801.1 | 2 | 2 | Remapped | NW_013171801.1 |
| NW_017363814.1 | Chr4|NW_017363814.1 | 2 | 2 | Remapped | NW_017363814.1 |
| NT_187547.1 | Chr5|NT_187547.1 | 1 | 1 | Remapped | NT_187547.1 |
| NT_187548.1 | Chr5|NT_187548.1 | 2 | 2 | Remapped | NT_187548.1 |
| NT_187549.1 | Chr5|NT_187549.1 | 4 | 4 | Remapped | NT_187549.1 |
| NT_187550.1 | Chr5|NT_187550.1 | 1 | 1 | Remapped | NT_187550.1 |
| NW_003315918.1 | Chr5|NW_003315918.1 | 3 | 3 | Remapped | NW_003315918.1 |
| NW_003315920.1 | Chr5|NW_003315920.1 | 2 | 2 | Remapped | NW_003315920.1 |
| NW_003571036.1 | Chr5|NW_003571036.1 | 1 | 1 | Remapped | NW_003571036.1 |
| NW_016107298.1 | Chr5|NW_016107298.1 | 4 | 4 | Remapped | NW_016107298.1 |
| NT_187692.1 | Chr6|NT_187692.1 | 2 | 2 | Remapped | NT_187692.1 |
| NT_167246.2 | Chr6|NT_167246.2 | 21 | 21 | Remapped | NT_167246.2 |
| NT_167247.2 | Chr6|NT_167247.2 | 23 | 23 | Remapped | NT_167247.2 |
| NT_167248.2 | Chr6|NT_167248.2 | 25 | 25 | Remapped | NT_167248.2 |
| NT_167249.2 | Chr6|NT_167249.2 | 22 | 22 | Remapped | NT_167249.2 |
| NT_167245.2 | Chr6|NT_167245.2 | 24 | 24 | Remapped | NT_167245.2 |
| NT_007592.16 | Chr6|NT_007592.16 | 9 | 9 | Remapped | NT_007592.16 |
| NT_025741.16 | Chr6|NT_025741.16 | 148 | 148 | Remapped | NT_025741.16 |
| NT_113891.3 | Chr6|NT_113891.3 | 25 | 25 | Remapped | NT_113891.3 |
| NT_167244.2 | Chr6|NT_167244.2 | 15 | 15 | Remapped | NT_167244.2 |
| NT_187552.1 | Chr6|NT_187552.1 | 44 | 44 | Remapped | NT_187552.1 |
| NT_187553.1 | Chr6|NT_187553.1 | 1 | 1 | Remapped | NT_187553.1 |
| NT_187554.1 | Chr6|NT_187554.1 | 2 | 2 | Remapped | NT_187554.1 |
| NT_187555.1 | Chr6|NT_187555.1 | 2 | 2 | Remapped | NT_187555.1 |
| NT_187556.1 | Chr6|NT_187556.1 | 4 | 4 | Remapped | NT_187556.1 |
| NT_187557.1 | Chr6|NT_187557.1 | 6 | 6 | Remapped | NT_187557.1 |
| NW_003315921.1 | Chr6|NW_003315921.1 | 13 | 13 | Remapped | NW_003315921.1 |
| NW_004166862.2 | Chr6|NW_004166862.2 | 2 | 2 | Remapped | NW_004166862.2 |
| NW_009646200.1 | Chr6|NW_009646200.1 | 4 | 4 | Remapped | NW_009646200.1 |
| NW_012132918.1 | Chr6|NW_012132918.1 | 1 | 1 | Remapped | NW_012132918.1 |
| NW_013171802.1 | Chr6|NW_013171802.1 | 12 | 12 | Remapped | NW_013171802.1 |
| NW_013171803.1 | Chr6|NW_013171803.1 | 2 | 2 | Remapped | NW_013171803.1 |
| NW_017363815.1 | Chr6|NW_017363815.1 | 1 | 1 | Remapped | NW_017363815.1 |
| NT_007819.18 | Chr7|NT_007819.18 | 31 | 31 | Remapped | NT_007819.18 |
| NT_007933.16 | Chr7|NT_007933.16 | 9 | 9 | Remapped | NT_007933.16 |
| NT_187558.1 | Chr7|NT_187558.1 | 2 | 2 | Remapped | NT_187558.1 |
| NT_187562.1 | Chr7|NT_187562.1 | 6 | 6 | Remapped | NT_187562.1 |
| NT_187564.1 | Chr7|NT_187564.1 | 3 | 3 | Remapped | NT_187564.1 |
| NT_187653.1 | Chr7|NT_187653.1 | 2 | 2 | Remapped | NT_187653.1 |
| NW_003315922.2 | Chr7|NW_003315922.2 | 1 | 1 | Remapped | NW_003315922.2 |
| NW_017852929.1 | Chr7|NW_017852929.1 | 1 | 1 | Remapped | NW_017852929.1 |
| NW_017852930.1 | Chr7|NW_017852930.1 | 1 | 1 | Remapped | NW_017852930.1 |
| NW_019805493.1 | Chr7|NW_019805493.1 | 3 | 3 | Remapped | NW_019805493.1 |
| NT_008046.17 | Chr8|NT_008046.17 | 3 | 3 | Remapped | NT_008046.17 |
| NT_008183.20 | Chr8|NT_008183.20 | 10 | 10 | Remapped | NT_008183.20 |
| NT_187565.1 | Chr8|NT_187565.1 | 2 | 2 | Remapped | NT_187565.1 |
| NT_187566.1 | Chr8|NT_187566.1 | 1 | 1 | Remapped | NT_187566.1 |
| NT_187567.1 | Chr8|NT_187567.1 | 4 | 4 | Remapped | NT_187567.1 |
| NT_187568.1 | Chr8|NT_187568.1 | 1 | 1 | Remapped | NT_187568.1 |
| NT_187571.1 | Chr8|NT_187571.1 | 3 | 3 | Remapped | NT_187571.1 |
| NT_187572.1 | Chr8|NT_187572.1 | 1 | 1 | Remapped | NT_187572.1 |
| NT_187573.1 | Chr8|NT_187573.1 | 1 | 1 | Remapped | NT_187573.1 |
| NT_187574.1 | Chr8|NT_187574.1 | 12 | 12 | Remapped | NT_187574.1 |
| NT_187575.1 | Chr8|NT_187575.1 | 2 | 2 | Remapped | NT_187575.1 |
| NT_187576.1 | Chr8|NT_187576.1 | 2 | 2 | Remapped | NT_187576.1 |
| NT_187654.1 | Chr8|NT_187654.1 | 2 | 2 | Remapped | NT_187654.1 |
| NW_017852931.1 | Chr8|NW_017852931.1 | 7 | 7 | Remapped | NW_017852931.1 |
| NW_017852932.1 | Chr8|NW_017852932.1 | 3 | 3 | Remapped | NW_017852932.1 |
| NW_018654717.1 | Chr8|NW_018654717.1 | 16 | 16 | Remapped | NW_018654717.1 |
| NT_008470.20 | Chr9|NT_008470.20 | 10 | 10 | Remapped | NT_008470.20 |
| NT_187578.1 | Chr9|NT_187578.1 | 2 | 2 | Remapped | NT_187578.1 |
| NW_013171804.1 | Chr9|NW_013171804.1 | 1 | 1 | Remapped | NW_013171804.1 |
| NT_030059.14 | Chr10|NT_030059.14 | 49 | 49 | Remapped | NT_030059.14 |
| NT_187580.1 | Chr10|NT_187580.1 | 5 | 5 | Remapped | NT_187580.1 |
| NW_003315934.1 | Chr10|NW_003315934.1 | 20 | 20 | Remapped | NW_003315934.1 |
| NW_003315935.1 | Chr10|NW_003315935.1 | 3 | 3 | Remapped | NW_003315935.1 |
| NW_009646202.1 | Chr10|NW_009646202.1 | 2 | 2 | Remapped | NW_009646202.1 |
| NT_187681.1 | Chr11|NT_187681.1 | 9 | 9 | Remapped | NT_187681.1 |
| NT_187657.1 | Chr11|NT_187657.1 | 1 | 1 | Remapped | NT_187657.1 |
| NT_187581.1 | Chr11|NT_187581.1 | 1 | 1 | Remapped | NT_187581.1 |
| NT_187582.1 | Chr11|NT_187582.1 | 2 | 2 | Remapped | NT_187582.1 |
| NT_187583.1 | Chr11|NT_187583.1 | 3 | 3 | Remapped | NT_187583.1 |
| NT_187584.1 | Chr11|NT_187584.1 | 1 | 1 | Remapped | NT_187584.1 |
| NT_187585.1 | Chr11|NT_187585.1 | 3 | 3 | Remapped | NT_187585.1 |
| NT_187586.1 | Chr11|NT_187586.1 | 1 | 1 | Remapped | NT_187586.1 |
| NW_003315936.1 | Chr11|NW_003315936.1 | 1 | 1 | Remapped | NW_003315936.1 |
| NW_003871073.1 | Chr11|NW_003871073.1 | 2 | 2 | Remapped | NW_003871073.1 |
| NW_011332695.1 | Chr11|NW_011332695.1 | 4 | 4 | Remapped | NW_011332695.1 |
| NW_013171808.1 | Chr11|NW_013171808.1 | 6 | 6 | Remapped | NW_013171808.1 |
| NW_015148966.1 | Chr11|NW_015148966.1 | 10 | 10 | Remapped | NW_015148966.1 |
| NW_019805496.1 | Chr11|NW_019805496.1 | 1 | 1 | Remapped | NW_019805496.1 |
| NW_019805497.1 | Chr11|NW_019805497.1 | 7 | 7 | Remapped | NW_019805497.1 |
| NW_019805498.1 | Chr11|NW_019805498.1 | 4 | 4 | Remapped | NW_019805498.1 |
| NT_024477.15 | Chr12|NT_024477.15 | 1 | 1 | Remapped | NT_024477.15 |
| NT_029419.13 | Chr12|NT_029419.13 | 1 | 1 | Remapped | NT_029419.13 |
| NT_187589.1 | Chr12|NT_187589.1 | 1 | 1 | Remapped | NT_187589.1 |
| NT_187590.1 | Chr12|NT_187590.1 | 2 | 2 | Remapped | NT_187590.1 |
| NT_187591.1 | Chr12|NT_187591.1 | 1 | 1 | Remapped | NT_187591.1 |
| NW_003315939.2 | Chr12|NW_003315939.2 | 4 | 4 | Remapped | NW_003315939.2 |
| NW_003315941.1 | Chr12|NW_003315941.1 | 4 | 4 | Remapped | NW_003315941.1 |
| NW_003315942.2 | Chr12|NW_003315942.2 | 1 | 1 | Remapped | NW_003315942.2 |
| NW_011332697.1 | Chr12|NW_011332697.1 | 11 | 11 | Remapped | NW_011332697.1 |
| NW_013171809.1 | Chr12|NW_013171809.1 | 3 | 3 | Remapped | NW_013171809.1 |
| NW_018654718.1 | Chr12|NW_018654718.1 | 4 | 4 | Remapped | NW_018654718.1 |
| NW_018654720.1 | Chr12|NW_018654720.1 | 3 | 3 | Remapped | NW_018654720.1 |
| NW_019805499.1 | Chr12|NW_019805499.1 | 12 | 12 | Remapped | NW_019805499.1 |
| NT_187593.1 | Chr13|NT_187593.1 | 6 | 6 | Remapped | NT_187593.1 |
| NT_187595.1 | Chr13|NT_187595.1 | 5 | 5 | Remapped | NT_187595.1 |
| NW_013171810.1 | Chr13|NW_013171810.1 | 12 | 12 | Remapped | NW_013171810.1 |
| NW_013171811.1 | Chr13|NW_013171811.1 | 2 | 2 | Remapped | NW_013171811.1 |
| NT_187598.1 | Chr14|NT_187598.1 | 4 | 4 | Remapped | NT_187598.1 |
| NT_187599.1 | Chr14|NT_187599.1 | 2 | 2 | Remapped | NT_187599.1 |
| NT_187600.1 | Chr14|NT_187600.1 | 3 | 3 | Remapped | NT_187600.1 |
| NT_187601.1 | Chr14|NT_187601.1 | 6 | 6 | Remapped | NT_187601.1 |
| NW_018654721.1 | Chr14|NW_018654721.1 | 1 | 1 | Remapped | NW_018654721.1 |
| NW_018654722.1 | Chr14|NW_018654722.1 | 2 | 2 | Remapped | NW_018654722.1 |
| NT_187659.1 | Chr15|NT_187659.1 | 1 | 1 | Remapped | NT_187659.1 |
| NT_187660.1 | Chr15|NT_187660.1 | 12 | 12 | Remapped | NT_187660.1 |
| NT_010194.18 | Chr15|NT_010194.18 | 6 | 6 | Remapped | NT_010194.18 |
| NT_187603.1 | Chr15|NT_187603.1 | 1 | 1 | Remapped | NT_187603.1 |
| NT_187605.1 | Chr15|NT_187605.1 | 2 | 2 | Remapped | NT_187605.1 |
| NT_187606.1 | Chr15|NT_187606.1 | 1 | 1 | Remapped | NT_187606.1 |
| NW_003315944.2 | Chr15|NW_003315944.2 | 48 | 48 | Remapped | NW_003315944.2 |
| NW_011332701.1 | Chr15|NW_011332701.1 | 16 | 16 | Remapped | NW_011332701.1 |
| NT_187607.1 | Chr16|NT_187607.1 | 2 | 2 | Remapped | NT_187607.1 |
| NT_187608.1 | Chr16|NT_187608.1 | 1 | 1 | Remapped | NT_187608.1 |
| NT_187609.1 | Chr16|NT_187609.1 | 2 | 2 | Remapped | NT_187609.1 |
| NW_003315946.1 | Chr16|NW_003315946.1 | 3 | 3 | Remapped | NW_003315946.1 |
| NW_012132921.1 | Chr16|NW_012132921.1 | 6 | 6 | Remapped | NW_012132921.1 |
| NW_013171812.1 | Chr16|NW_013171812.1 | 5 | 5 | Remapped | NW_013171812.1 |
| NW_013171813.1 | Chr16|NW_013171813.1 | 2 | 2 | Remapped | NW_013171813.1 |
| NW_017852933.1 | Chr16|NW_017852933.1 | 1 | 1 | Remapped | NW_017852933.1 |
| NW_019805500.1 | Chr16|NW_019805500.1 | 2 | 2 | Remapped | NW_019805500.1 |
| NT_187662.1 | Chr17|NT_187662.1 | 1 | 1 | Remapped | NT_187662.1 |
| NT_187663.1 | Chr17|NT_187663.1 | 3 | 3 | Remapped | NT_187663.1 |
| NT_167251.2 | Chr17|NT_167251.2 | 3 | 3 | Remapped | NT_167251.2 |
| NT_187612.1 | Chr17|NT_187612.1 | 1 | 1 | Remapped | NT_187612.1 |
| NT_187614.1 | Chr17|NT_187614.1 | 3 | 3 | Remapped | NT_187614.1 |
| NT_187616.1 | Chr17|NT_187616.1 | 9 | 9 | Remapped | NT_187616.1 |
| NW_003315952.3 | Chr17|NW_003315952.3 | 1 | 1 | Remapped | NW_003315952.3 |
| NW_003315954.1 | Chr17|NW_003315954.1 | 1 | 1 | Remapped | NW_003315954.1 |
| NW_003315955.1 | Chr17|NW_003315955.1 | 1 | 1 | Remapped | NW_003315955.1 |
| NW_017363817.1 | Chr17|NW_017363817.1 | 5 | 5 | Remapped | NW_017363817.1 |
| NW_017363818.1 | Chr17|NW_017363818.1 | 4 | 4 | Remapped | NW_017363818.1 |
| NW_017363819.1 | Chr17|NW_017363819.1 | 3 | 3 | Remapped | NW_017363819.1 |
| NW_019805501.1 | Chr17|NW_019805501.1 | 9 | 9 | Remapped | NW_019805501.1 |
| NT_187665.1 | Chr18|NT_187665.1 | 1 | 1 | Remapped | NT_187665.1 |
| NT_187666.1 | Chr18|NT_187666.1 | 1 | 1 | Remapped | NT_187666.1 |
| NT_187618.1 | Chr18|NT_187618.1 | 3 | 3 | Remapped | NT_187618.1 |
| NW_003315956.1 | Chr18|NW_003315956.1 | 1 | 1 | Remapped | NW_003315956.1 |
| NW_003315957.1 | Chr18|NW_003315957.1 | 5 | 5 | Remapped | NW_003315957.1 |
| NW_003315958.1 | Chr18|NW_003315958.1 | 1 | 1 | Remapped | NW_003315958.1 |
| NW_003315960.1 | Chr18|NW_003315960.1 | 11 | 11 | Remapped | NW_003315960.1 |
| NW_003315961.1 | Chr18|NW_003315961.1 | 1 | 1 | Remapped | NW_003315961.1 |
| NW_013171814.1 | Chr18|NW_013171814.1 | 10 | 10 | Remapped | NW_013171814.1 |
| NW_014040928.1 | Chr18|NW_014040928.1 | 5 | 5 | Remapped | NW_014040928.1 |
| NW_018654724.1 | Chr18|NW_018654724.1 | 2 | 2 | Remapped | NW_018654724.1 |
| NW_019805502.1 | Chr18|NW_019805502.1 | 1 | 1 | Remapped | NW_019805502.1 |
| NW_019805503.1 | Chr18|NW_019805503.1 | 5 | 5 | Remapped | NW_019805503.1 |
| NT_187619.1 | Chr19|NT_187619.1 | 5 | 5 | Remapped | NT_187619.1 |
| NT_187620.1 | Chr19|NT_187620.1 | 1 | 1 | Remapped | NT_187620.1 |
| NT_187621.1 | Chr19|NT_187621.1 | 3 | 3 | Remapped | NT_187621.1 |
| NW_003315963.1 | Chr19|NW_003315963.1 | 8 | 8 | Remapped | NW_003315963.1 |
| NT_011362.11 | Chr20|NT_011362.11 | 1 | 1 | Remapped | NT_011362.11 |
| NT_187623.1 | Chr20|NT_187623.1 | 2 | 2 | Remapped | NT_187623.1 |
| NT_187625.1 | Chr20|NT_187625.1 | 1 | 1 | Remapped | NT_187625.1 |
| NT_187304.1 | Chr21|NT_187304.1 | 38 | 38 | Remapped | NT_187304.1 |
| NT_187305.1 | Chr21|NT_187305.1 | 22 | 22 | Remapped | NT_187305.1 |
| NT_187311.1 | Chr21|NT_187311.1 | 10 | 10 | Remapped | NT_187311.1 |
| NT_187314.1 | Chr21|NT_187314.1 | 35 | 35 | Remapped | NT_187314.1 |
| NT_187317.1 | Chr21|NT_187317.1 | 54 | 54 | Remapped | NT_187317.1 |
| NT_187318.1 | Chr21|NT_187318.1 | 41 | 41 | Remapped | NT_187318.1 |
| NT_187627.1 | Chr21|NT_187627.1 | 1 | 1 | Remapped | NT_187627.1 |
| NT_187628.1 | Chr21|NT_187628.1 | 1 | 1 | Remapped | NT_187628.1 |
| NW_003315967.2 | Chr21|NW_003315967.2 | 3 | 3 | Remapped | NW_003315967.2 |
| NW_003315968.2 | Chr21|NW_003315968.2 | 1 | 1 | Remapped | NW_003315968.2 |
| NW_003315969.2 | Chr21|NW_003315969.2 | 3 | 3 | Remapped | NW_003315969.2 |
| NW_003315970.2 | Chr21|NW_003315970.2 | 3 | 3 | Remapped | NW_003315970.2 |
| NT_187388.1 | Chr22|NT_187388.1 | 51 | 51 | Remapped | NT_187388.1 |
| NT_187629.1 | Chr22|NT_187629.1 | 15 | 15 | Remapped | NT_187629.1 |
| NT_187630.1 | Chr22|NT_187630.1 | 3 | 3 | Remapped | NT_187630.1 |
| NT_187631.1 | Chr22|NT_187631.1 | 1 | 1 | Remapped | NT_187631.1 |
| NW_017363820.1 | ChrX|NW_017363820.1 | 9 | 9 | Remapped | NW_017363820.1 |
| NT_011681.17 | ChrX|NT_011681.17 | 1 | 1 | Remapped | NT_011681.17 |
| NT_167197.2 | ChrX|NT_167197.2 | 26 | 26 | Remapped | NT_167197.2 |
| NT_167205.2 | ChrY|NT_167205.2 | 26 | 26 | Remapped | NT_167205.2 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.10 | Chr1 | 903 | 903 | Remapped | NC_000001.10 |
| NC_000002.11 | Chr2 | 733 | 733 | Remapped | NC_000002.11 |
| NC_000003.11 | Chr3 | 586 | 586 | Remapped | NC_000003.11 |
| NC_000004.11 | Chr4 | 490 | 490 | Remapped | NC_000004.11 |
| NC_000005.9 | Chr5 | 400 | 400 | Remapped | NC_000005.9 |
| NC_000006.11 | Chr6 | 706 | 706 | Remapped | NC_000006.11 |
| NC_000007.13 | Chr7 | 512 | 512 | Remapped | NC_000007.13 |
| NC_000008.10 | Chr8 | 456 | 456 | Remapped | NC_000008.10 |
| NC_000009.11 | Chr9 | 408 | 408 | Remapped | NC_000009.11 |
| NC_000010.10 | Chr10 | 453 | 453 | Remapped | NC_000010.10 |
| NC_000011.9 | Chr11 | 429 | 429 | Remapped | NC_000011.9 |
| NC_000012.11 | Chr12 | 455 | 455 | Remapped | NC_000012.11 |
| NC_000013.10 | Chr13 | 268 | 268 | Remapped | NC_000013.10 |
| NC_000014.8 | Chr14 | 236 | 236 | Remapped | NC_000014.8 |
| NC_000015.9 | Chr15 | 285 | 285 | Remapped | NC_000015.9 |
| NC_000016.9 | Chr16 | 241 | 241 | Remapped | NC_000016.9 |
| NC_000017.10 | Chr17 | 268 | 268 | Remapped | NC_000017.10 |
| NC_000018.9 | Chr18 | 236 | 236 | Remapped | NC_000018.9 |
| NC_000019.9 | Chr19 | 200 | 200 | Remapped | NC_000019.9 |
| NC_000020.10 | Chr20 | 245 | 245 | Remapped | NC_000020.10 |
| NC_000021.8 | Chr21 | 122 | 122 | Remapped | NC_000021.8 |
| NC_000022.10 | Chr22 | 152 | 152 | Remapped | NC_000022.10 |
| NC_000023.10 | ChrX | 316 | 316 | Remapped | NC_000023.10 |
| NC_000024.9 | ChrY | 15 | 15 | Remapped | NC_000024.9 |
| NT_167214.1 | Unplaced|NT_167214.1 | 54 | 54 | Remapped | NT_167214.1 |
| NT_167218.1 | Unplaced|NT_167218.1 | 1 | 1 | Remapped | NT_167218.1 |
| NW_003315903.1 | Chr1|NW_003315903.1 | 9 | 9 | Remapped | NW_003315903.1 |
| NW_003315904.1 | Chr1|NW_003315904.1 | 7 | 7 | Remapped | NW_003315904.1 |
| NW_003315905.1 | Chr1|NW_003315905.1 | 1 | 1 | Remapped | NW_003315905.1 |
| NW_003315907.1 | Chr1|NW_003315907.1 | 4 | 4 | Remapped | NW_003315907.1 |
| NW_003571030.1 | Chr1|NW_003571030.1 | 1 | 1 | Remapped | NW_003571030.1 |
| NW_003871055.3 | Chr1|NW_003871055.3 | 3 | 3 | Remapped | NW_003871055.3 |
| NW_003871056.3 | Chr1|NW_003871056.3 | 1 | 1 | Remapped | NW_003871056.3 |
| NW_003871057.1 | Chr1|NW_003871057.1 | 5 | 5 | Remapped | NW_003871057.1 |
| NW_004070865.1 | Chr1|NW_004070865.1 | 1 | 1 | Remapped | NW_004070865.1 |
| NW_004070864.1 | Chr1|NW_004070864.1 | 1 | 1 | Remapped | NW_004070864.1 |
| NW_003315909.1 | Chr2|NW_003315909.1 | 12 | 12 | Remapped | NW_003315909.1 |
| NW_003571032.1 | Chr2|NW_003571032.1 | 2 | 2 | Remapped | NW_003571032.1 |
| NW_004504299.1 | Chr2|NW_004504299.1 | 3 | 3 | Remapped | NW_004504299.1 |
| NW_003315910.1 | Chr3|NW_003315910.1 | 3 | 3 | Remapped | NW_003315910.1 |
| NW_003315911.1 | Chr3|NW_003315911.1 | 16 | 16 | Remapped | NW_003315911.1 |
| NW_003315912.1 | Chr3|NW_003315912.1 | 13 | 13 | Remapped | NW_003315912.1 |
| NW_003315913.1 | Chr3|NW_003315913.1 | 9 | 9 | Remapped | NW_003315913.1 |
| NW_003871058.1 | Chr3|NW_003871058.1 | 1 | 1 | Remapped | NW_003871058.1 |
| NW_003871060.1 | Chr3|NW_003871060.1 | 1 | 1 | Remapped | NW_003871060.1 |
| NW_003315914.1 | Chr4|NW_003315914.1 | 7 | 7 | Remapped | NW_003315914.1 |
| NW_003315916.1 | Chr4|NW_003315916.1 | 1 | 1 | Remapped | NW_003315916.1 |
| NW_003571035.1 | Chr4|NW_003571035.1 | 8 | 8 | Remapped | NW_003571035.1 |
| NW_004775427.1 | Chr4|NW_004775427.1 | 5 | 5 | Remapped | NW_004775427.1 |
| NW_003315918.1 | Chr5|NW_003315918.1 | 3 | 3 | Remapped | NW_003315918.1 |
| NW_003315920.1 | Chr5|NW_003315920.1 | 2 | 2 | Remapped | NW_003315920.1 |
| NW_003571036.1 | Chr5|NW_003571036.1 | 1 | 1 | Remapped | NW_003571036.1 |
| NW_004775428.1 | Chr5|NW_004775428.1 | 1 | 1 | Remapped | NW_004775428.1 |
| NT_113891.2 | Chr6|NT_113891.2 | 25 | 25 | Remapped | NT_113891.2 |
| NT_167244.1 | Chr6|NT_167244.1 | 15 | 15 | Remapped | NT_167244.1 |
| NT_167245.1 | Chr6|NT_167245.1 | 24 | 24 | Remapped | NT_167245.1 |
| NT_167246.1 | Chr6|NT_167246.1 | 21 | 21 | Remapped | NT_167246.1 |
| NT_167247.1 | Chr6|NT_167247.1 | 23 | 23 | Remapped | NT_167247.1 |
| NT_167248.1 | Chr6|NT_167248.1 | 24 | 24 | Remapped | NT_167248.1 |
| NT_167249.1 | Chr6|NT_167249.1 | 21 | 21 | Remapped | NT_167249.1 |
| NW_003315921.1 | Chr6|NW_003315921.1 | 13 | 13 | Remapped | NW_003315921.1 |
| NW_003871062.1 | Chr6|NW_003871062.1 | 1 | 1 | Remapped | NW_003871062.1 |
| NW_004166862.1 | Chr6|NW_004166862.1 | 2 | 2 | Remapped | NW_004166862.1 |
| NW_004504300.1 | Chr6|NW_004504300.1 | 48 | 48 | Remapped | NW_004504300.1 |
| NW_003315922.2 | Chr7|NW_003315922.2 | 1 | 1 | Remapped | NW_003315922.2 |
| NW_003571037.1 | Chr7|NW_003571037.1 | 2 | 2 | Remapped | NW_003571037.1 |
| NW_003571040.1 | Chr7|NW_003571040.1 | 6 | 6 | Remapped | NW_003571040.1 |
| NW_003571041.1 | Chr7|NW_003571041.1 | 34 | 34 | Remapped | NW_003571041.1 |
| NW_003871064.1 | Chr7|NW_003871064.1 | 4 | 4 | Remapped | NW_003871064.1 |
| NW_003871065.1 | Chr7|NW_003871065.1 | 33 | 33 | Remapped | NW_003871065.1 |
| NW_003315923.1 | Chr8|NW_003315923.1 | 22 | 22 | Remapped | NW_003315923.1 |
| NW_003571042.1 | Chr8|NW_003571042.1 | 1 | 1 | Remapped | NW_003571042.1 |
| NW_003315926.1 | Chr9|NW_003315926.1 | 3 | 3 | Remapped | NW_003315926.1 |
| NW_003315927.1 | Chr9|NW_003315927.1 | 5 | 5 | Remapped | NW_003315927.1 |
| NW_004070868.1 | Chr9|NW_004070868.1 | 17 | 17 | Remapped | NW_004070868.1 |
| NW_004070869.1 | Chr9|NW_004070869.1 | 16 | 16 | Remapped | NW_004070869.1 |
| NW_004504301.1 | Chr9|NW_004504301.1 | 33 | 33 | Remapped | NW_004504301.1 |
| NW_003315933.1 | Chr10|NW_003315933.1 | 7 | 7 | Remapped | NW_003315933.1 |
| NW_003315934.1 | Chr10|NW_003315934.1 | 16 | 16 | Remapped | NW_003315934.1 |
| NW_003315935.1 | Chr10|NW_003315935.1 | 2 | 2 | Remapped | NW_003315935.1 |
| NW_003871068.1 | Chr10|NW_003871068.1 | 6 | 6 | Remapped | NW_003871068.1 |
| NW_004070870.1 | Chr10|NW_004070870.1 | 31 | 31 | Remapped | NW_004070870.1 |
| NW_004775432.1 | Chr10|NW_004775432.1 | 1 | 1 | Remapped | NW_004775432.1 |
| NW_003315936.1 | Chr11|NW_003315936.1 | 1 | 1 | Remapped | NW_003315936.1 |
| NW_003571046.1 | Chr11|NW_003571046.1 | 15 | 15 | Remapped | NW_003571046.1 |
| NW_003871072.2 | Chr11|NW_003871072.2 | 1 | 1 | Remapped | NW_003871072.2 |
| NW_003871073.1 | Chr11|NW_003871073.1 | 2 | 2 | Remapped | NW_003871073.1 |
| NW_003871075.1 | Chr11|NW_003871075.1 | 1 | 1 | Remapped | NW_003871075.1 |
| NW_004070871.1 | Chr11|NW_004070871.1 | 15 | 15 | Remapped | NW_004070871.1 |
| NW_003315937.1 | Chr12|NW_003315937.1 | 2 | 2 | Remapped | NW_003315937.1 |
| NW_003315939.1 | Chr12|NW_003315939.1 | 4 | 4 | Remapped | NW_003315939.1 |
| NW_003315941.1 | Chr12|NW_003315941.1 | 4 | 4 | Remapped | NW_003315941.1 |
| NW_003315942.2 | Chr12|NW_003315942.2 | 1 | 1 | Remapped | NW_003315942.2 |
| NW_003871083.2 | Chr12|NW_003871083.2 | 3 | 3 | Remapped | NW_003871083.2 |
| NW_004504303.2 | Chr12|NW_004504303.2 | 2 | 2 | Remapped | NW_004504303.2 |
| NW_004166863.1 | Chr14|NW_004166863.1 | 7 | 7 | Remapped | NW_004166863.1 |
| NW_003315944.1 | Chr15|NW_003315944.1 | 46 | 46 | Remapped | NW_003315944.1 |
| NW_003871084.1 | Chr15|NW_003871084.1 | 7 | 7 | Remapped | NW_003871084.1 |
| NW_003315946.1 | Chr16|NW_003315946.1 | 3 | 3 | Remapped | NW_003315946.1 |
| NT_167251.1 | Chr17|NT_167251.1 | 4 | 4 | Remapped | NT_167251.1 |
| NW_003315947.1 | Chr17|NW_003315947.1 | 6 | 6 | Remapped | NW_003315947.1 |
| NW_003315949.1 | Chr17|NW_003315949.1 | 1 | 1 | Remapped | NW_003315949.1 |
| NW_003315950.2 | Chr17|NW_003315950.2 | 1 | 1 | Remapped | NW_003315950.2 |
| NW_003315951.1 | Chr17|NW_003315951.1 | 1 | 1 | Remapped | NW_003315951.1 |
| NW_003315954.1 | Chr17|NW_003315954.1 | 1 | 1 | Remapped | NW_003315954.1 |
| NW_003315955.1 | Chr17|NW_003315955.1 | 1 | 1 | Remapped | NW_003315955.1 |
| NW_003571052.1 | Chr17|NW_003571052.1 | 2 | 2 | Remapped | NW_003571052.1 |
| NW_003871086.1 | Chr17|NW_003871086.1 | 2 | 2 | Remapped | NW_003871086.1 |
| NW_003871087.1 | Chr17|NW_003871087.1 | 9 | 9 | Remapped | NW_003871087.1 |
| NW_003871089.1 | Chr17|NW_003871089.1 | 2 | 2 | Remapped | NW_003871089.1 |
| NW_004070872.2 | Chr17|NW_004070872.2 | 1 | 1 | Remapped | NW_004070872.2 |
| NW_004166864.2 | Chr17|NW_004166864.2 | 1 | 1 | Remapped | NW_004166864.2 |
| NW_003315956.1 | Chr18|NW_003315956.1 | 1 | 1 | Remapped | NW_003315956.1 |
| NW_003315957.1 | Chr18|NW_003315957.1 | 3 | 3 | Remapped | NW_003315957.1 |
| NW_003315958.1 | Chr18|NW_003315958.1 | 1 | 1 | Remapped | NW_003315958.1 |
| NW_003315960.1 | Chr18|NW_003315960.1 | 9 | 9 | Remapped | NW_003315960.1 |
| NW_003315961.1 | Chr18|NW_003315961.1 | 1 | 1 | Remapped | NW_003315961.1 |
| NW_003315963.1 | Chr19|NW_003315963.1 | 7 | 7 | Remapped | NW_003315963.1 |
| NW_003871094.1 | Chr19|NW_003871094.1 | 2 | 2 | Remapped | NW_003871094.1 |
| NW_004775434.1 | Chr19|NW_004775434.1 | 4 | 4 | Remapped | NW_004775434.1 |
| NW_003571063.2 | Chr20|NW_003571063.2 | 24 | 24 | Remapped | NW_003571063.2 |
| NW_003871095.1 | Chr20|NW_003871095.1 | 2 | 2 | Remapped | NW_003871095.1 |
| NW_004504304.1 | Chr20|NW_004504304.1 | 32 | 32 | Remapped | NW_004504304.1 |
| NW_003315967.1 | Chr21|NW_003315967.1 | 3 | 3 | Remapped | NW_003315967.1 |
| NW_003315968.1 | Chr21|NW_003315968.1 | 1 | 1 | Remapped | NW_003315968.1 |
| NW_003315969.1 | Chr21|NW_003315969.1 | 3 | 3 | Remapped | NW_003315969.1 |
| NW_003315970.1 | Chr21|NW_003315970.1 | 2 | 2 | Remapped | NW_003315970.1 |
| NW_004775435.1 | Chr21|NW_004775435.1 | 1 | 1 | Remapped | NW_004775435.1 |
| NW_003315971.2 | Chr22|NW_003315971.2 | 1 | 1 | Remapped | NW_003315971.2 |
| NW_003871096.1 | Chr22|NW_003871096.1 | 1 | 1 | Remapped | NW_003871096.1 |
| NW_003871098.1 | ChrX|NW_003871098.1 | 5 | 5 | Remapped | NW_003871098.1 |
| NW_003871099.1 | ChrX|NW_003871099.1 | 2 | 2 | Remapped | NW_003871099.1 |
| NW_003871100.1 | ChrX|NW_003871100.1 | 15 | 15 | Remapped | NW_003871100.1 |
| NW_003871103.3 | ChrX|NW_003871103.3 | 62 | 62 | Remapped | NW_003871103.3 |
| NW_004070877.1 | ChrX|NW_004070877.1 | 4 | 4 | Remapped | NW_004070877.1 |
| NW_004070879.1 | ChrX|NW_004070879.1 | 1 | 1 | Remapped | NW_004070879.1 |
| NW_004070880.2 | ChrX|NW_004070880.2 | 11 | 11 | Remapped | NW_004070880.2 |
| NW_004070881.1 | ChrX|NW_004070881.1 | 1 | 1 | Remapped | NW_004070881.1 |
| NW_004070882.1 | ChrX|NW_004070882.1 | 2 | 2 | Remapped | NW_004070882.1 |
| NW_004070884.1 | ChrX|NW_004070884.1 | 1 | 1 | Remapped | NW_004070884.1 |
| NW_004070885.1 | ChrX|NW_004070885.1 | 1 | 1 | Remapped | NW_004070885.1 |
| NW_004070886.1 | ChrX|NW_004070886.1 | 2 | 2 | Remapped | NW_004070886.1 |
| NW_004070887.1 | ChrX|NW_004070887.1 | 2 | 2 | Remapped | NW_004070887.1 |
| NW_004070889.1 | ChrX|NW_004070889.1 | 1 | 1 | Remapped | NW_004070889.1 |
| NW_004070890.2 | ChrX|NW_004070890.2 | 17 | 17 | Remapped | NW_004070890.2 |
| NW_004070891.1 | ChrX|NW_004070891.1 | 1 | 1 | Remapped | NW_004070891.1 |
| NW_004070892.1 | ChrX|NW_004070892.1 | 1 | 1 | Remapped | NW_004070892.1 |
| NW_003871103.2 | ChrX|NW_003871103.2 | 1 | 1 | Remapped | NW_003871103.2 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.9 | Chr1 | 18 | 18 | Submitted | NC_000001.9 |
| NC_000002.10 | Chr2 | 21 | 21 | Submitted | NC_000002.10 |
| NC_000003.10 | Chr3 | 14 | 14 | Submitted | NC_000003.10 |
| NC_000004.10 | Chr4 | 12 | 12 | Submitted | NC_000004.10 |
| NC_000005.8 | Chr5 | 5 | 5 | Submitted | NC_000005.8 |
| NC_000006.10 | Chr6 | 19 | 19 | Submitted | NC_000006.10 |
| NC_000007.12 | Chr7 | 8 | 8 | Submitted | NC_000007.12 |
| NC_000008.9 | Chr8 | 8 | 8 | Submitted | NC_000008.9 |
| NC_000009.10 | Chr9 | 7 | 7 | Submitted | NC_000009.10 |
| NC_000010.9 | Chr10 | 11 | 11 | Submitted | NC_000010.9 |
| NC_000011.8 | Chr11 | 18 | 18 | Submitted | NC_000011.8 |
| NC_000012.10 | Chr12 | 9 | 9 | Submitted | NC_000012.10 |
| NC_000013.9 | Chr13 | 4 | 4 | Submitted | NC_000013.9 |
| NC_000014.7 | Chr14 | 9 | 9 | Submitted | NC_000014.7 |
| NC_000015.8 | Chr15 | 5 | 5 | Submitted | NC_000015.8 |
| NC_000016.8 | Chr16 | 9 | 9 | Submitted | NC_000016.8 |
| NC_000017.9 | Chr17 | 5 | 5 | Submitted | NC_000017.9 |
| NC_000018.8 | Chr18 | 11 | 11 | Submitted | NC_000018.8 |
| NC_000019.8 | Chr19 | 6 | 6 | Submitted | NC_000019.8 |
| NC_000020.9 | Chr20 | 9 | 9 | Submitted | NC_000020.9 |
| NC_000021.7 | Chr21 | 7 | 7 | Submitted | NC_000021.7 |
| NC_000022.9 | Chr22 | 5 | 5 | Submitted | NC_000022.9 |
| NC_000023.9 | ChrX | 2 | 2 | Submitted | NC_000023.9 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.8 | Chr1 | 876 | 876 | Submitted | NC_000001.8 |
| NC_000002.9 | Chr2 | 705 | 705 | Submitted | NC_000002.9 |
| NC_000003.9 | Chr3 | 570 | 570 | Submitted | NC_000003.9 |
| NC_000004.9 | Chr4 | 471 | 471 | Submitted | NC_000004.9 |
| NC_000005.8 | Chr5 | 395 | 395 | Submitted | NC_000005.8 |
| NC_000006.9 | Chr6 | 688 | 688 | Submitted | NC_000006.9 |
| NC_000007.11 | Chr7 | 474 | 474 | Submitted | NC_000007.11 |
| NC_000008.9 | Chr8 | 438 | 438 | Submitted | NC_000008.9 |
| NC_000009.9 | Chr9 | 400 | 400 | Submitted | NC_000009.9 |
| NC_000010.8 | Chr10 | 442 | 442 | Submitted | NC_000010.8 |
| NC_000011.8 | Chr11 | 417 | 417 | Submitted | NC_000011.8 |
| NC_000012.9 | Chr12 | 444 | 444 | Submitted | NC_000012.9 |
| NC_000013.9 | Chr13 | 264 | 264 | Submitted | NC_000013.9 |
| NC_000014.7 | Chr14 | 227 | 227 | Submitted | NC_000014.7 |
| NC_000015.8 | Chr15 | 275 | 275 | Submitted | NC_000015.8 |
| NC_000016.8 | Chr16 | 232 | 232 | Submitted | NC_000016.8 |
| NC_000017.9 | Chr17 | 266 | 266 | Submitted | NC_000017.9 |
| NC_000018.8 | Chr18 | 225 | 225 | Submitted | NC_000018.8 |
| NC_000019.8 | Chr19 | 194 | 194 | Submitted | NC_000019.8 |
| NC_000020.9 | Chr20 | 236 | 236 | Submitted | NC_000020.9 |
| NC_000021.7 | Chr21 | 115 | 115 | Submitted | NC_000021.7 |
| NC_000022.8 | Chr22 | 147 | 147 | Submitted | NC_000022.8 |
| NC_000023.8 | ChrX | 318 | 318 | Submitted | NC_000023.8 |
| NC_000024.7 | ChrY | 1 | 1 | Submitted | NC_000024.7 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.8 | Chr1 | 876 | 845 | 0 | 0 | 0 | 31 | 876 | 845 | 0 | 0 | 0 | 31 |
| NC_000002.9 | Chr2 | 705 | 688 | 0 | 0 | 0 | 17 | 705 | 688 | 0 | 0 | 0 | 17 |
| NC_000003.9 | Chr3 | 570 | 533 | 0 | 0 | 1 | 36 | 570 | 533 | 0 | 0 | 1 | 36 |
| NC_000004.9 | Chr4 | 471 | 452 | 0 | 0 | 0 | 19 | 471 | 452 | 0 | 0 | 0 | 19 |
| NC_000005.8 | Chr5 | 395 | 389 | 0 | 0 | 0 | 6 | 395 | 389 | 0 | 0 | 0 | 6 |
| NC_000006.9 | Chr6 | 688 | 596 | 0 | 0 | 3 | 89 | 688 | 596 | 0 | 0 | 3 | 89 |
| NC_000007.11 | Chr7 | 474 | 402 | 0 | 0 | 0 | 72 | 474 | 402 | 0 | 0 | 0 | 72 |
| NC_000008.9 | Chr8 | 438 | 417 | 0 | 0 | 1 | 20 | 438 | 417 | 0 | 0 | 1 | 20 |
| NC_000009.9 | Chr9 | 400 | 329 | 0 | 0 | 0 | 71 | 400 | 329 | 0 | 0 | 0 | 71 |
| NC_000010.8 | Chr10 | 442 | 380 | 0 | 0 | 0 | 62 | 442 | 380 | 0 | 0 | 0 | 62 |
| NC_000011.8 | Chr11 | 417 | 387 | 0 | 0 | 0 | 30 | 417 | 387 | 0 | 0 | 0 | 30 |
| NC_000012.9 | Chr12 | 444 | 428 | 0 | 0 | 0 | 16 | 444 | 428 | 0 | 0 | 0 | 16 |
| NC_000013.9 | Chr13 | 264 | 264 | 0 | 0 | 0 | 0 | 264 | 264 | 0 | 0 | 0 | 0 |
| NC_000014.7 | Chr14 | 227 | 222 | 0 | 0 | 0 | 5 | 227 | 222 | 0 | 0 | 0 | 5 |
| NC_000015.8 | Chr15 | 275 | 222 | 0 | 0 | 0 | 53 | 275 | 222 | 0 | 0 | 0 | 53 |
| NC_000016.8 | Chr16 | 232 | 229 | 0 | 0 | 0 | 3 | 232 | 229 | 0 | 0 | 0 | 3 |
| NC_000017.9 | Chr17 | 266 | 241 | 0 | 0 | 0 | 25 | 266 | 241 | 0 | 0 | 0 | 25 |
| NC_000018.8 | Chr18 | 225 | 211 | 0 | 0 | 0 | 14 | 225 | 211 | 0 | 0 | 0 | 14 |
| NC_000019.8 | Chr19 | 194 | 181 | 0 | 0 | 0 | 13 | 194 | 181 | 0 | 0 | 0 | 13 |
| NC_000020.9 | Chr20 | 236 | 179 | 0 | 0 | 0 | 57 | 236 | 179 | 0 | 0 | 0 | 57 |
| NC_000021.7 | Chr21 | 115 | 105 | 0 | 0 | 0 | 10 | 115 | 105 | 0 | 0 | 0 | 10 |
| NC_000022.8 | Chr22 | 147 | 145 | 0 | 0 | 0 | 2 | 147 | 145 | 0 | 0 | 0 | 2 |
| NC_000023.8 | ChrX | 318 | 208 | 0 | 0 | 0 | 110 | 318 | 208 | 0 | 0 | 0 | 110 |
| NC_000024.7 | ChrY | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.8 | Chr1 | 876 | 813 | 0 | 0 | 0 | 63 | 876 | 813 | 0 | 0 | 0 | 63 |
| NC_000002.9 | Chr2 | 705 | 659 | 0 | 0 | 0 | 46 | 705 | 659 | 0 | 0 | 0 | 46 |
| NC_000003.9 | Chr3 | 570 | 494 | 0 | 0 | 1 | 75 | 570 | 494 | 0 | 0 | 1 | 75 |
| NC_000004.9 | Chr4 | 471 | 447 | 0 | 0 | 0 | 24 | 471 | 447 | 0 | 0 | 0 | 24 |
| NC_000005.8 | Chr5 | 395 | 378 | 0 | 0 | 0 | 17 | 395 | 378 | 0 | 0 | 0 | 17 |
| NC_000006.9 | Chr6 | 688 | 570 | 0 | 0 | 3 | 115 | 688 | 570 | 0 | 0 | 3 | 115 |
| NC_000007.11 | Chr7 | 474 | 457 | 0 | 0 | 0 | 17 | 474 | 457 | 0 | 0 | 0 | 17 |
| NC_000008.9 | Chr8 | 438 | 384 | 0 | 0 | 1 | 53 | 438 | 384 | 0 | 0 | 1 | 53 |
| NC_000009.9 | Chr9 | 400 | 395 | 0 | 0 | 2 | 3 | 400 | 395 | 0 | 0 | 2 | 3 |
| NC_000010.8 | Chr10 | 442 | 416 | 0 | 0 | 1 | 25 | 442 | 416 | 0 | 0 | 1 | 25 |
| NC_000011.8 | Chr11 | 417 | 375 | 0 | 0 | 0 | 42 | 417 | 375 | 0 | 0 | 0 | 42 |
| NC_000012.9 | Chr12 | 444 | 401 | 0 | 0 | 0 | 43 | 444 | 401 | 0 | 0 | 0 | 43 |
| NC_000013.9 | Chr13 | 264 | 241 | 0 | 0 | 0 | 23 | 264 | 241 | 0 | 0 | 0 | 23 |
| NC_000014.7 | Chr14 | 227 | 209 | 0 | 0 | 0 | 18 | 227 | 209 | 0 | 0 | 0 | 18 |
| NC_000015.8 | Chr15 | 275 | 209 | 0 | 0 | 0 | 66 | 275 | 209 | 0 | 0 | 0 | 66 |
| NC_000016.8 | Chr16 | 232 | 210 | 0 | 0 | 0 | 22 | 232 | 210 | 0 | 0 | 0 | 22 |
| NC_000017.9 | Chr17 | 266 | 236 | 0 | 0 | 0 | 30 | 266 | 236 | 0 | 0 | 0 | 30 |
| NC_000018.8 | Chr18 | 225 | 187 | 0 | 0 | 0 | 38 | 225 | 187 | 0 | 0 | 0 | 38 |
| NC_000019.8 | Chr19 | 194 | 178 | 0 | 0 | 0 | 16 | 194 | 178 | 0 | 0 | 0 | 16 |
| NC_000020.9 | Chr20 | 236 | 233 | 0 | 0 | 0 | 3 | 236 | 233 | 0 | 0 | 0 | 3 |
| NC_000021.7 | Chr21 | 115 | 105 | 0 | 0 | 0 | 10 | 115 | 105 | 0 | 0 | 0 | 10 |
| NC_000022.8 | Chr22 | 147 | 130 | 0 | 0 | 0 | 17 | 147 | 130 | 0 | 0 | 0 | 17 |
| NC_000023.8 | ChrX | 318 | 308 | 0 | 0 | 1 | 9 | 318 | 308 | 0 | 0 | 1 | 9 |
| NC_000024.7 | ChrY | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.9 | Chr1 | 18 | 18 | 0 | 0 | 0 | 0 | 18 | 18 | 0 | 0 | 0 | 0 |
| NC_000002.10 | Chr2 | 21 | 21 | 0 | 0 | 0 | 0 | 21 | 21 | 0 | 0 | 0 | 0 |
| NC_000003.10 | Chr3 | 14 | 11 | 0 | 0 | 0 | 3 | 14 | 11 | 0 | 0 | 0 | 3 |
| NC_000004.10 | Chr4 | 12 | 11 | 0 | 0 | 0 | 1 | 12 | 11 | 0 | 0 | 0 | 1 |
| NC_000005.8 | Chr5 | 5 | 5 | 0 | 0 | 0 | 0 | 5 | 5 | 0 | 0 | 0 | 0 |
| NC_000006.10 | Chr6 | 19 | 18 | 0 | 0 | 0 | 1 | 19 | 18 | 0 | 0 | 0 | 1 |
| NC_000007.12 | Chr7 | 8 | 7 | 0 | 0 | 0 | 1 | 8 | 7 | 0 | 0 | 0 | 1 |
| NC_000008.9 | Chr8 | 8 | 7 | 0 | 0 | 0 | 1 | 8 | 7 | 0 | 0 | 0 | 1 |
| NC_000009.10 | Chr9 | 7 | 7 | 0 | 0 | 0 | 0 | 7 | 7 | 0 | 0 | 0 | 0 |
| NC_000010.9 | Chr10 | 11 | 10 | 0 | 0 | 0 | 1 | 11 | 10 | 0 | 0 | 0 | 1 |
| NC_000011.8 | Chr11 | 18 | 18 | 0 | 0 | 0 | 0 | 18 | 18 | 0 | 0 | 0 | 0 |
| NC_000012.10 | Chr12 | 9 | 9 | 0 | 0 | 0 | 0 | 9 | 9 | 0 | 0 | 0 | 0 |
| NC_000013.9 | Chr13 | 4 | 4 | 0 | 0 | 0 | 0 | 4 | 4 | 0 | 0 | 0 | 0 |
| NC_000014.7 | Chr14 | 9 | 7 | 0 | 0 | 0 | 2 | 9 | 7 | 0 | 0 | 0 | 2 |
| NC_000015.8 | Chr15 | 5 | 5 | 0 | 0 | 0 | 0 | 5 | 5 | 0 | 0 | 0 | 0 |
| NC_000016.8 | Chr16 | 9 | 9 | 0 | 0 | 0 | 0 | 9 | 9 | 0 | 0 | 0 | 0 |
| NC_000017.9 | Chr17 | 5 | 4 | 0 | 0 | 0 | 1 | 5 | 4 | 0 | 0 | 0 | 1 |
| NC_000018.8 | Chr18 | 11 | 11 | 0 | 0 | 0 | 0 | 11 | 11 | 0 | 0 | 0 | 0 |
| NC_000019.8 | Chr19 | 6 | 6 | 0 | 0 | 0 | 0 | 6 | 6 | 0 | 0 | 0 | 0 |
| NC_000020.9 | Chr20 | 9 | 8 | 0 | 0 | 0 | 1 | 9 | 8 | 0 | 0 | 0 | 1 |
| NC_000021.7 | Chr21 | 7 | 7 | 0 | 0 | 0 | 0 | 7 | 7 | 0 | 0 | 0 | 0 |
| NC_000022.9 | Chr22 | 5 | 5 | 0 | 0 | 0 | 0 | 5 | 5 | 0 | 0 | 0 | 0 |
| NC_000023.9 | ChrX | 2 | 2 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 0 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.9 | Chr1 | 18 | 12 | 0 | 0 | 2 | 4 | 18 | 12 | 0 | 0 | 2 | 4 |
| NC_000002.10 | Chr2 | 21 | 17 | 0 | 0 | 1 | 3 | 21 | 17 | 0 | 0 | 1 | 3 |
| NC_000003.10 | Chr3 | 14 | 12 | 0 | 0 | 0 | 2 | 14 | 12 | 0 | 0 | 0 | 2 |
| NC_000004.10 | Chr4 | 12 | 8 | 0 | 0 | 0 | 4 | 12 | 8 | 0 | 0 | 0 | 4 |
| NC_000005.8 | Chr5 | 5 | 5 | 0 | 0 | 0 | 0 | 5 | 5 | 0 | 0 | 0 | 0 |
| NC_000006.10 | Chr6 | 19 | 14 | 0 | 0 | 1 | 4 | 19 | 14 | 0 | 0 | 1 | 4 |
| NC_000007.12 | Chr7 | 8 | 8 | 0 | 0 | 0 | 0 | 8 | 8 | 0 | 0 | 0 | 0 |
| NC_000008.9 | Chr8 | 8 | 5 | 0 | 0 | 1 | 2 | 8 | 5 | 0 | 0 | 1 | 2 |
| NC_000009.10 | Chr9 | 7 | 7 | 0 | 0 | 0 | 0 | 7 | 7 | 0 | 0 | 0 | 0 |
| NC_000010.9 | Chr10 | 11 | 6 | 0 | 0 | 0 | 5 | 11 | 6 | 0 | 0 | 0 | 5 |
| NC_000011.8 | Chr11 | 18 | 17 | 0 | 0 | 0 | 1 | 18 | 17 | 0 | 0 | 0 | 1 |
| NC_000012.10 | Chr12 | 9 | 6 | 0 | 0 | 0 | 3 | 9 | 6 | 0 | 0 | 0 | 3 |
| NC_000013.9 | Chr13 | 4 | 2 | 0 | 0 | 0 | 2 | 4 | 2 | 0 | 0 | 0 | 2 |
| NC_000014.7 | Chr14 | 9 | 8 | 0 | 0 | 1 | 0 | 9 | 8 | 0 | 0 | 1 | 0 |
| NC_000015.8 | Chr15 | 5 | 2 | 0 | 0 | 1 | 2 | 5 | 2 | 0 | 0 | 1 | 2 |
| NC_000016.8 | Chr16 | 9 | 7 | 0 | 0 | 0 | 2 | 9 | 7 | 0 | 0 | 0 | 2 |
| NC_000017.9 | Chr17 | 5 | 3 | 0 | 0 | 1 | 1 | 5 | 3 | 0 | 0 | 1 | 1 |
| NC_000018.8 | Chr18 | 11 | 6 | 0 | 0 | 0 | 5 | 11 | 6 | 0 | 0 | 0 | 5 |
| NC_000019.8 | Chr19 | 6 | 5 | 0 | 0 | 0 | 1 | 6 | 5 | 0 | 0 | 0 | 1 |
| NC_000020.9 | Chr20 | 9 | 9 | 0 | 0 | 0 | 0 | 9 | 9 | 0 | 0 | 0 | 0 |
| NC_000021.7 | Chr21 | 7 | 5 | 0 | 0 | 0 | 2 | 7 | 5 | 0 | 0 | 0 | 2 |
| NC_000022.9 | Chr22 | 5 | 3 | 0 | 0 | 0 | 2 | 5 | 3 | 0 | 0 | 0 | 2 |
| NC_000023.9 | ChrX | 2 | 2 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 0 |
Samplesets
Number of Samplesets: 1
- Name:
- Fosmid9
- Description:
- 8 HapMap and 1 PDR individual
- Size:
- 9
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
| Sample ID | Cell Type | Subject ID | Sex | Ethnicity | Subject Age | Subject Phenotype |
|---|---|---|---|---|---|---|
| SAMN00001588 | B-Lymphocyte | NA18517 | Female | YORUBA | Not reported | |
| NA12156 | B-Lymphocyte | NA12156 | Female | CEPH-European | 81 Years | Not reported |
| NA18507 | B-Lymphocyte | NA18507 | Male | YORUBA | Not reported | |
| SAMN00000376 | B-Lymphocyte | NA15510 | Not reported | |||
| NA12878 | B-Lymphocyte | NA12878 | Female | CEPH-European | Not reported | |
| NA19129 | B-Lymphocyte | NA19129 | Female | YORUBA | Not reported | |
| NA18956 | B-Lymphocyte | NA18956 | Female | JAPANESE | Not reported | |
| NA19240 | B-Lymphocyte | NA19240 | Female | YORUBA | Not reported | |
| NA18555 | B-Lymphocyte | NA18555 | Female | HAN CHINESE | Not reported |
Experimental Details
| Experiment ID | Type | Method | Analysis | Platforms | Data | Number of Variant Calls |
|---|---|---|---|---|---|---|
| 1 | Discovery | Sequencing | Paired-end mapping | Agilent Custom Human 244K CGH Array, Capillary | ABC10, ABC11, ABC12, ABC13, ABC14, ABC7, ABC8, ABC9, GEO, WI2 | 7,240 |
| 2 | Discovery | Sequencing | One end anchored assembly | Agilent Custom Human 244K CGH Array, Capillary | ABC10, ABC11, ABC12, ABC13, ABC14, ABC7, ABC8, ABC9, GEO, WI2 | 2,363 |
| 3 | Discovery | Sequencing | Sequence alignment | Agilent Custom Human 244K CGH Array, Capillary | ABC10, ABC11, ABC12, ABC13, ABC14, ABC7, ABC8, ABC9, GEO, WI2 | 222 |
| 4 | Validation | Oligo aCGH | Probe signal intensity | Agilent Custom Human 244K CGH Array | GEO | 7,240 |
Validations
| Experiment ID | Method | Analysis | Platform | Data | Number of Variant Calls Validated |
|---|---|---|---|---|---|
| 4 | Oligo aCGH | Probe signal intensity | Agilent Custom Human 244K CGH Array | GEO | 7,240 |