nsv522711
- Organism: Homo sapiens
- Study:nstd21 (Shaikh et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:19,801
- Publication(s):Shaikh et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 461 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 463 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 13 SVs from 3 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv522711 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 3,480,671 | 3,500,471 |
| nsv522711 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 3,480,671 | 3,500,471 |
| nsv522711 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000009.9 | Chr9 | 3,470,671 | 3,490,471 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv706124 | copy number gain | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv706124 | Remapped | Perfect | NC_000009.12:g.(?_ 3480671)_(3500471_ ?)dup | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 3,480,671 | 3,500,471 |
| nssv706124 | Remapped | Perfect | NC_000009.11:g.(?_ 3480671)_(3500471_ ?)dup | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 3,480,671 | 3,500,471 |
| nssv706124 | Submitted genomic | NC_000009.9:g.(?_3 470671)_(3490471_? )dup | NCBI35 (hg17) | NC_000009.9 | Chr9 | 3,470,671 | 3,490,471 |