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dbVar

Database of genomic structural variation

nsv1722

Organism: Homo sapiens

Study:nstd2 (Kidd et al. 2008)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:NCBI35 (hg17)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:44,851

Publication(s):Kidd et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 316 SVs from 57 studies. See in: genome view

Remapped(Score: Perfect):5,031,097-5,075,947

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv1722	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	5,031,097	5,075,947
nsv1722	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	5,081,098	5,125,948
nsv1722	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000016.8	Chr16	5,021,099	5,065,949

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv7227	deletion	NA12156	Sequencing	Paired-end mapping	3,265

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nssv7227	Remapped	Perfect	NC_000016.10:g.(50 31097_?)_(?_507594 7)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	5,031,097	5,075,947
nssv7227	Remapped	Perfect	NC_000016.9:g.(508 1098_?)_(?_5125948 )del	GRCh37.p13	First Pass	NC_000016.9	Chr16	5,081,098	5,125,948
nssv7227	Submitted genomic		NC_000016.8:g.(502 1099_?)_(?_5065949 )del5410	NCBI35 (hg17)		NC_000016.8	Chr16	5,021,099	5,065,949

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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