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nsv2788072

  • Variant Calls:8
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:43,177

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 2217 SVs from 92 studies. See in: genome view    
Remapped(Score: Perfect):32,637,290-32,680,466Question Mark
Overlapping variant regions from other studies: 681 SVs from 34 studies. See in: genome view    
Remapped(Score: Pass):3,938,352-3,972,325Question Mark
Overlapping variant regions from other studies: 555 SVs from 34 studies. See in: genome view    
Remapped(Score: Pass):4,039,221-4,065,138Question Mark
Overlapping variant regions from other studies: 784 SVs from 29 studies. See in: genome view    
Remapped(Score: Pass):3,881,209-3,917,678Question Mark
Overlapping variant regions from other studies: 2217 SVs from 92 studies. See in: genome view    
Remapped(Score: Perfect):32,605,067-32,648,243Question Mark
Overlapping variant regions from other studies: 889 SVs from 30 studies. See in: genome view    
Remapped(Score: Pass):3,886,794-3,923,263Question Mark
Overlapping variant regions from other studies: 680 SVs from 34 studies. See in: genome view    
Remapped(Score: Pass):3,943,937-3,977,910Question Mark
Overlapping variant regions from other studies: 875 SVs from 35 studies. See in: genome view    
Remapped(Score: Pass):4,038,519-4,064,436Question Mark
Overlapping variant regions from other studies: 1323 SVs from 28 studies. See in: genome view    
Submitted genomic32,713,045-32,756,221Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv2788072RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr632,637,29032,680,466
nsv2788072RemappedPassGRCh38.p12ALT_REF_LOCI_5Second PassNT_167247.2Chr6|NT_16
7247.2		3,938,3523,972,325
nsv2788072RemappedPassGRCh38.p12ALT_REF_LOCI_7Second PassNT_167249.2Chr6|NT_16
7249.2		4,039,2214,065,138
nsv2788072RemappedPassGRCh38.p12ALT_REF_LOCI_3Second PassNT_167245.2Chr6|NT_16
7245.2		3,881,2093,917,678
nsv2788072RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr632,605,06732,648,243
nsv2788072RemappedPassGRCh37.p13ALT_REF_LOCI_3Second PassNT_167245.1Chr6|NT_16
7245.1		3,886,7943,923,263
nsv2788072RemappedPassGRCh37.p13ALT_REF_LOCI_5Second PassNT_167247.1Chr6|NT_16
7247.1		3,943,9373,977,910
nsv2788072RemappedPassGRCh37.p13ALT_REF_LOCI_7Second PassNT_167249.1Chr6|NT_16
7249.1		4,038,5194,064,436
nsv2788072Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr632,713,04532,756,221

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv13670063copy number lossCGPQ-543SNP arrayGenotyping5
nssv13670064copy number lossCGPQ-990SNP arrayGenotyping6
nssv13670065copy number lossCGPQ-324SNP arrayGenotyping12
nssv13670066copy number lossCGPQ-2235SNP arrayGenotypingnssv13674627, nssv13665635, nssv13668094
nssv13670067copy number lossCGPQ-700SNP arrayGenotypingnssv13670319, nssv13667892
nssv13670068copy number lossCGPQ-711SNP arrayGenotyping10
nssv13670069copy number lossCGPQ-97SNP arrayGenotyping8
nssv13670070copy number lossCGPQ-344SNP arrayGenotypingnssv13660792, nssv13662726

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv13670063RemappedPassNT_167247.2:g.(?_3
938352)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,938,3523,972,325
nssv13670064RemappedPassNT_167247.2:g.(?_3
938352)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,938,3523,972,325
nssv13670065RemappedPassNT_167247.2:g.(?_3
938352)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,938,3523,972,325
nssv13670066RemappedPassNT_167247.2:g.(?_3
938352)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,938,3523,972,325
nssv13670067RemappedPassNT_167247.2:g.(?_3
938352)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,938,3523,972,325
nssv13670068RemappedPassNT_167247.2:g.(?_3
938352)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,938,3523,972,325
nssv13670069RemappedPassNT_167247.2:g.(?_3
938352)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,938,3523,972,325
nssv13670070RemappedPassNT_167247.2:g.(?_3
938352)_(3972325_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,938,3523,972,325
nssv13670063RemappedPassNT_167249.2:g.(?_4
039221)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		4,039,2214,065,138
nssv13670064RemappedPassNT_167249.2:g.(?_4
039221)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		4,039,2214,065,138
nssv13670065RemappedPassNT_167249.2:g.(?_4
039221)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		4,039,2214,065,138
nssv13670066RemappedPassNT_167249.2:g.(?_4
039221)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		4,039,2214,065,138
nssv13670067RemappedPassNT_167249.2:g.(?_4
039221)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		4,039,2214,065,138
nssv13670068RemappedPassNT_167249.2:g.(?_4
039221)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		4,039,2214,065,138
nssv13670069RemappedPassNT_167249.2:g.(?_4
039221)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		4,039,2214,065,138
nssv13670070RemappedPassNT_167249.2:g.(?_4
039221)_(4065138_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		4,039,2214,065,138
nssv13670063RemappedPassNT_167245.2:g.(?_3
881209)_(3917678_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,881,2093,917,678
nssv13670064RemappedPassNT_167245.2:g.(?_3
881209)_(3917678_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,881,2093,917,678
nssv13670065RemappedPassNT_167245.2:g.(?_3
881209)_(3917678_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,881,2093,917,678
nssv13670066RemappedPassNT_167245.2:g.(?_3
881209)_(3917678_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,881,2093,917,678
nssv13670067RemappedPassNT_167245.2:g.(?_3
881209)_(3917678_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,881,2093,917,678
nssv13670068RemappedPassNT_167245.2:g.(?_3
881209)_(3917678_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,881,2093,917,678
nssv13670069RemappedPassNT_167245.2:g.(?_3
881209)_(3917678_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,881,2093,917,678
nssv13670070RemappedPassNT_167245.2:g.(?_3
881209)_(3917678_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,881,2093,917,678
nssv13670063RemappedPerfectNC_000006.12:g.(?_
32637290)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,637,29032,680,466
nssv13670064RemappedPerfectNC_000006.12:g.(?_
32637290)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,637,29032,680,466
nssv13670065RemappedPerfectNC_000006.12:g.(?_
32637290)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,637,29032,680,466
nssv13670066RemappedPerfectNC_000006.12:g.(?_
32637290)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,637,29032,680,466
nssv13670067RemappedPerfectNC_000006.12:g.(?_
32637290)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,637,29032,680,466
nssv13670068RemappedPerfectNC_000006.12:g.(?_
32637290)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,637,29032,680,466
nssv13670069RemappedPerfectNC_000006.12:g.(?_
32637290)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,637,29032,680,466
nssv13670070RemappedPerfectNC_000006.12:g.(?_
32637290)_(3268046
6_?)del		GRCh38.p12First PassNC_000006.12Chr632,637,29032,680,466
nssv13670063RemappedPassNT_167245.1:g.(?_3
886794)_(3923263_?
)delNT_167245.1:g.
(?_3886794)_(39232
63_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,886,7943,923,263
nssv13670064RemappedPassNT_167245.1:g.(?_3
886794)_(3923263_?
)delNT_167245.1:g.
(?_3886794)_(39232
63_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,886,7943,923,263
nssv13670065RemappedPassNT_167245.1:g.(?_3
886794)_(3923263_?
)delNT_167245.1:g.
(?_3886794)_(39232
63_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,886,7943,923,263
nssv13670066RemappedPassNT_167245.1:g.(?_3
886794)_(3923263_?
)delNT_167245.1:g.
(?_3886794)_(39232
63_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,886,7943,923,263
nssv13670067RemappedPassNT_167245.1:g.(?_3
886794)_(3923263_?
)delNT_167245.1:g.
(?_3886794)_(39232
63_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,886,7943,923,263
nssv13670068RemappedPassNT_167245.1:g.(?_3
886794)_(3923263_?
)delNT_167245.1:g.
(?_3886794)_(39232
63_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,886,7943,923,263
nssv13670069RemappedPassNT_167245.1:g.(?_3
886794)_(3923263_?
)delNT_167245.1:g.
(?_3886794)_(39232
63_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,886,7943,923,263
nssv13670070RemappedPassNT_167245.1:g.(?_3
886794)_(3923263_?
)delNT_167245.1:g.
(?_3886794)_(39232
63_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,886,7943,923,263
nssv13670063RemappedPassNT_167247.1:g.(?_3
943937)_(3977910_?
)delNT_167247.1:g.
(?_3943937)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,943,9373,977,910
nssv13670064RemappedPassNT_167247.1:g.(?_3
943937)_(3977910_?
)delNT_167247.1:g.
(?_3943937)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,943,9373,977,910
nssv13670065RemappedPassNT_167247.1:g.(?_3
943937)_(3977910_?
)delNT_167247.1:g.
(?_3943937)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,943,9373,977,910
nssv13670066RemappedPassNT_167247.1:g.(?_3
943937)_(3977910_?
)delNT_167247.1:g.
(?_3943937)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,943,9373,977,910
nssv13670067RemappedPassNT_167247.1:g.(?_3
943937)_(3977910_?
)delNT_167247.1:g.
(?_3943937)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,943,9373,977,910
nssv13670068RemappedPassNT_167247.1:g.(?_3
943937)_(3977910_?
)delNT_167247.1:g.
(?_3943937)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,943,9373,977,910
nssv13670069RemappedPassNT_167247.1:g.(?_3
943937)_(3977910_?
)delNT_167247.1:g.
(?_3943937)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,943,9373,977,910
nssv13670070RemappedPassNT_167247.1:g.(?_3
943937)_(3977910_?
)delNT_167247.1:g.
(?_3943937)_(39779
10_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,943,9373,977,910
nssv13670063RemappedPassNT_167249.1:g.(?_4
038519)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		4,038,5194,064,436
nssv13670064RemappedPassNT_167249.1:g.(?_4
038519)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		4,038,5194,064,436
nssv13670065RemappedPassNT_167249.1:g.(?_4
038519)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		4,038,5194,064,436
nssv13670066RemappedPassNT_167249.1:g.(?_4
038519)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		4,038,5194,064,436
nssv13670067RemappedPassNT_167249.1:g.(?_4
038519)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		4,038,5194,064,436
nssv13670068RemappedPassNT_167249.1:g.(?_4
038519)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		4,038,5194,064,436
nssv13670069RemappedPassNT_167249.1:g.(?_4
038519)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		4,038,5194,064,436
nssv13670070RemappedPassNT_167249.1:g.(?_4
038519)_(4064436_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		4,038,5194,064,436
nssv13670063RemappedPerfectNC_000006.11:g.(?_
32605067)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,605,06732,648,243
nssv13670064RemappedPerfectNC_000006.11:g.(?_
32605067)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,605,06732,648,243
nssv13670065RemappedPerfectNC_000006.11:g.(?_
32605067)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,605,06732,648,243
nssv13670066RemappedPerfectNC_000006.11:g.(?_
32605067)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,605,06732,648,243
nssv13670067RemappedPerfectNC_000006.11:g.(?_
32605067)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,605,06732,648,243
nssv13670068RemappedPerfectNC_000006.11:g.(?_
32605067)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,605,06732,648,243
nssv13670069RemappedPerfectNC_000006.11:g.(?_
32605067)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,605,06732,648,243
nssv13670070RemappedPerfectNC_000006.11:g.(?_
32605067)_(3264824
3_?)del		GRCh37.p13First PassNC_000006.11Chr632,605,06732,648,243
nssv13670063Submitted genomicNC_000006.10:g.(?_
32713045)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,713,04532,756,221
nssv13670064Submitted genomicNC_000006.10:g.(?_
32713045)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,713,04532,756,221
nssv13670065Submitted genomicNC_000006.10:g.(?_
32713045)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,713,04532,756,221
nssv13670066Submitted genomicNC_000006.10:g.(?_
32713045)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,713,04532,756,221
nssv13670067Submitted genomicNC_000006.10:g.(?_
32713045)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,713,04532,756,221
nssv13670068Submitted genomicNC_000006.10:g.(?_
32713045)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,713,04532,756,221
nssv13670069Submitted genomicNC_000006.10:g.(?_
32713045)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,713,04532,756,221
nssv13670070Submitted genomicNC_000006.10:g.(?_
32713045)_(3275622
1_?)del		NCBI36 (hg18)NC_000006.10Chr632,713,04532,756,221

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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