nsv3236804
- Organism: Homo sapiens
- Study:nstd152 (Chaisson et al. 2019)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38 (hg38)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:27,429
- Publication(s):Chaisson et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 188 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 188 SVs from 43 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3236804 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000014.9 | Chr14 | 60,447,092 (-15, +15) | 60,474,520 (-15, +15) | ||
| nsv3236804 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000014.8 | Chr14 | 60,913,810 (-15, +15) | 60,941,238 (-15, +15) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv14370217 | inversion | SAMN00001695 | Sequencing | Sequence alignment | Heterozygous | 15,732 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14370217 | Submitted genomic | NC_000014.9:g.(604 47077_60447107)_(6 0474505_60474535)i nv27428 | GRCh38 (hg38) | NC_000014.9 | Chr14 | 60,447,092 (-15, +15) | 60,474,520 (-15, +15) | ||
| nssv14370217 | Remapped | Perfect | NC_000014.8:g.(609 13795_60913825)_(6 0941223_60941253)i nv27428 | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 60,913,810 (-15, +15) | 60,941,238 (-15, +15) |