nsv3955155
- Organism: Homo sapiens
- Study:nstd167 (Wenger et al. 2019)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:149
- Publication(s):Wenger et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 43 SVs from 8 studies. See in: genome view
Overlapping variant regions from other studies: 43 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3955155 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 128,225,903 | 128,226,051 |
| nsv3955155 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 128,983,477 | 128,983,625 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv15178344 | deletion | SAMN03283347 | Sequencing | de novo and local sequence assembly | Homozygous | 30,634 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15178344 | Remapped | Perfect | NC_000002.12:g.128 225903_128226051de l | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 128,225,903 | 128,226,051 |
| nssv15178344 | Submitted genomic | NC_000002.11:g.128 983477_128983625de l | GRCh37 (hg19) | NC_000002.11 | Chr2 | 128,983,477 | 128,983,625 |