nsv4581107
- Organism: Homo sapiens
- Study:nstd183 (DECIPHER Consensus CNVs)
- Variant Type:copy number variation
- Method Type:Curated
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:297
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 117 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 117 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4581107 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 40,304,515 | 40,304,811 |
| nsv4581107 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 40,770,187 | 40,770,483 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16101151 | deletion | Curated | Curated |
| nssv16104366 | duplication | Curated | Curated |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16101151 | Remapped | Perfect | NC_000001.11:g.(?_ 40304515)_(4030481 1_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 40,304,515 | 40,304,811 |
| nssv16104366 | Remapped | Perfect | NC_000001.11:g.(?_ 40304515)_(4030481 1_?)dup | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 40,304,515 | 40,304,811 |
| nssv16101151 | Submitted genomic | NC_000001.10:g.(?_ 40770187)_(4077048 3_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 40,770,187 | 40,770,483 | ||
| nssv16104366 | Submitted genomic | NC_000001.10:g.(?_ 40770187)_(4077048 3_?)dup | GRCh37 (hg19) | NC_000001.10 | Chr1 | 40,770,187 | 40,770,483 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16101151 | 0.007 | 6 | 845 |
| nssv16104366 | 0.001 | 1 | 845 |