nsv4683689
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1,074,894
- Description:NC_000016.10:g.(?_3727698)_(4802591_?)dup AND Amelocerebrohypohidrotic syndrome
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3712 SVs from 96 studies. See in: genome view
Overlapping variant regions from other studies: 3712 SVs from 96 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4683689 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 3,727,698 | 4,802,591 |
nsv4683689 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 3,777,699 | 4,852,592 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv16214725 | duplication | Multiple | Multiple | Amelocerebrohypohidrotic syndrome; KOHLSCHUTTER-TONZ SYNDROME; KTZS; Kohlschutter syndrome | Uncertain significance | ClinVar | RCV001031942.2, VCV000831384.2 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16214725 | Remapped | Perfect | NC_000016.10:g.(?_ 3727698)_(4802591_ ?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 3,727,698 | 4,802,591 |
nssv16214725 | Submitted genomic | NC_000016.9:g.(?_3 777699)_(4852592_? )dup | GRCh37 (hg19) | NC_000016.9 | Chr16 | 3,777,699 | 4,852,592 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv16214725 | GRCh37: NC_000016.9:g.(?_3777699)_(4852592_?)dup | duplication | germline | Amelocerebrohypohidrotic syndrome; KOHLSCHUTTER-TONZ SYNDROME; KTZS; Kohlschutter syndrome | Uncertain significance | ClinVar | RCV001031942.2, VCV000831384.2 |