Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv4838998

Organism: Homo sapiens

Study:nstd200 (Abel et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:380

Publication(s):Abel et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 107 SVs from 24 studies. See in: genome view

Remapped(Score: Perfect):103,366,340-103,366,723

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4838998	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	103,366,342 (-2, +101)	103,366,721 (-84, +2)
nsv4838998	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	105,126,099 (-2, +101)	105,126,478 (-84, +2)

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16353781	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16353781	Remapped	Perfect	NC_000010.11:g.(10 3366340_103366443) _(103366637_103366 723)del	GRCh38.p12	First Pass	NC_000010.11	Chr10	103,366,342 (-2, +101)	103,366,721 (-84, +2)
nssv16353781	Submitted genomic		NC_000010.10:g.(10 5126097_105126200) _(105126394_105126 480)del	GRCh37 (hg19)		NC_000010.10	Chr10	105,126,099 (-2, +101)	105,126,478 (-84, +2)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16353781	<0.001	2	16834

You are here: NCBI