nsv4852119
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,183
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 274 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 274 SVs from 21 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4852119 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 12,344,535 (-2, +72) | 12,346,717 (-42, +3) |
nsv4852119 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000018.9 | Chr18 | 12,344,534 (-2, +72) | 12,346,716 (-42, +3) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16371588 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16371588 | Remapped | Perfect | NC_000018.10:g.(12 344533_12344607)_( 12346675_12346720) del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 12,344,535 (-2, +72) | 12,346,717 (-42, +3) |
nssv16371588 | Submitted genomic | NC_000018.9:g.(123 44532_12344606)_(1 2346674_12346719)d el | GRCh37 (hg19) | NC_000018.9 | Chr18 | 12,344,534 (-2, +72) | 12,346,716 (-42, +3) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16371588 | <0.001 | 1 | 16834 |