nsv4872387
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,952,651
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3168 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 3168 SVs from 78 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4872387 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 136,450,319 (-1, +1) | 138,402,969 (-1, +1) |
nsv4872387 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 135,532,478 (-1, +1) | 137,485,128 (-1, +1) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16412869 | inversion | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16412869 | Remapped | Perfect | NC_000023.11:g.(13 6450318_136450320) _(138402968_138402 970)inv | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 136,450,319 (-1, +1) | 138,402,969 (-1, +1) |
nssv16412869 | Submitted genomic | NC_000023.10:g.(13 5532477_135532479) _(137485127_137485 129)inv | GRCh37 (hg19) | NC_000023.10 | ChrX | 135,532,478 (-1, +1) | 137,485,128 (-1, +1) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16412869 | <0.001 | 8 | 16834 |