nsv5014269
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:25,013
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 371 SVs from 47 studies. See in: genome view
Overlapping variant regions from other studies: 371 SVs from 47 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5014269 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000018.10 | Chr18 | 9,868,139 (-60, +2) | 9,893,151 (-3, +56) | ||
nsv5014269 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000018.9 | Chr18 | 9,868,136 (-60, +2) | 9,893,148 (-3, +56) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16576460 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16576460 | Submitted genomic | NC_000018.10:g.(98 68079_9868141)_(98 93148_9893207)dup | GRCh38 (hg38) | NC_000018.10 | Chr18 | 9,868,139 (-60, +2) | 9,893,151 (-3, +56) | ||
nssv16576460 | Remapped | Perfect | NC_000018.9:g.(986 8076_9868138)_(989 3145_9893204)dup | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 9,868,136 (-60, +2) | 9,893,148 (-3, +56) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16576460 | <0.001 | 1 | 29246 |