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dbVar

Database of genomic structural variation

nsv5485253

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:56

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 125 SVs from 45 studies. See in: genome view

Submitted genomic66,132,020-66,132,075

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5485253	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000007.14	Chr7	66,132,020	66,132,075
nsv5485253	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	65,597,007	65,597,062

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16997628	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16997628	Submitted genomic		NC_000007.14:g.661 32020_66132075dup	GRCh38 (hg38)		NC_000007.14	Chr7	66,132,020	66,132,075
nssv16997628	Remapped	Perfect	NC_000007.13:g.655 97007_65597062dup	GRCh37.p13	First Pass	NC_000007.13	Chr7	65,597,007	65,597,062

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16997628	0.793	4147	5226

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