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dbVar

Database of genomic structural variation

nsv5566406

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:134

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 154 SVs from 44 studies. See in: genome view

Submitted genomic179,693,332-179,693,465

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5566406	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	179,693,332	179,693,465
nsv5566406	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	179,120,333	179,120,466

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17128328	deletion	SAMN00006579	Sequencing	Sequence alignment	23,265

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17128328	Submitted genomic		NC_000005.10:g.179 693332_179693465de lG	GRCh38 (hg38)		NC_000005.10	Chr5	179,693,332	179,693,465
nssv17128328	Remapped	Perfect	NC_000005.9:g.1791 20333_179120466del G	GRCh37.p13	First Pass	NC_000005.9	Chr5	179,120,333	179,120,466

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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