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dbVar

Database of genomic structural variation

nsv5580720

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:146

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 116 SVs from 27 studies. See in: genome view

Submitted genomic77,042,787-77,042,932

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5580720	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	77,042,787	77,042,932
nsv5580720	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	76,338,612	76,338,757

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17155798	deletion	SAMN00006579	Sequencing	Sequence alignment	23,265

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17155798	Submitted genomic		NC_000005.10:g.770 42787_77042932delA	GRCh38 (hg38)		NC_000005.10	Chr5	77,042,787	77,042,932
nssv17155798	Remapped	Perfect	NC_000005.9:g.7633 8612_76338757delA	GRCh37.p13	First Pass	NC_000005.9	Chr5	76,338,612	76,338,757

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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