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dbVar

Database of genomic structural variation

nsv5580763

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:192

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 113 SVs from 26 studies. See in: genome view

Submitted genomic77,042,480-77,042,671

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5580763	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	77,042,480	77,042,671
nsv5580763	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	76,338,305	76,338,496

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17145855	deletion	HG03486	Sequencing	Sequence alignment	4,355

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17145855	Submitted genomic		NC_000005.10:g.770 42480_77042671delC	GRCh38 (hg38)		NC_000005.10	Chr5	77,042,480	77,042,671
nssv17145855	Remapped	Perfect	NC_000005.9:g.7633 8305_76338496delC	GRCh37.p13	First Pass	NC_000005.9	Chr5	76,338,305	76,338,496

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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