nsv5880056
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:335,422
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1091 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 1093 SVs from 90 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5880056 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 111,195,040 | 111,530,461 | ||
| nsv5880056 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 111,737,662 | 112,073,083 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17356798 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17356798 | Submitted genomic | NC_000001.11:g.111 195040_111530461de l | GRCh38 (hg38) | NC_000001.11 | Chr1 | 111,195,040 | 111,530,461 | ||
| nssv17356798 | Remapped | Perfect | NC_000001.10:g.111 737662_112073083de l | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 111,737,662 | 112,073,083 |