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dbVar

Database of genomic structural variation

nsv5901509

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:131

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 160 SVs from 17 studies. See in: genome view

Submitted genomic174,216,155-174,216,285

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5901509	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	174,216,155	174,216,285
nsv5901509	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	175,080,883	175,081,013

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17394839	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17394839	Submitted genomic		NC_000002.12:g.174 216155_174216285de l	GRCh38 (hg38)		NC_000002.12	Chr2	174,216,155	174,216,285
nssv17394839	Remapped	Perfect	NC_000002.11:g.175 080883_175081013de l	GRCh37.p13	First Pass	NC_000002.11	Chr2	175,080,883	175,081,013

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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