nsv605135
- Organism: Homo sapiens
- Study:nstd54 (Cooper et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:198,446
- Publication(s):Cooper et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2403 SVs from 98 studies. See in: genome view
Overlapping variant regions from other studies: 2403 SVs from 98 studies. See in: genome view
Overlapping variant regions from other studies: 654 SVs from 28 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv605135 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 162,295,509 | 162,493,954 |
| nsv605135 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 162,716,541 | 162,914,986 |
| nsv605135 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 162,636,531 | 162,834,976 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1154684 | copy number gain | 1780854305_A | SNP array | SNP genotyping analysis | nssv1154177, nssv1156758 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1154684 | Remapped | Perfect | NC_000006.12:g.(?_ 162295509)_(162493 954_?)dup | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 162,295,509 | 162,493,954 |
| nssv1154684 | Remapped | Perfect | NC_000006.11:g.(?_ 162716541)_(162914 986_?)dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 162,716,541 | 162,914,986 |
| nssv1154684 | Submitted genomic | NC_000006.10:g.(?_ 162636531)_(162834 976_?)dup | NCBI36 (hg18) | NC_000006.10 | Chr6 | 162,636,531 | 162,834,976 |