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Items: 1 to 20 of 40

1.

Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_10]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. Oligonucleotide probes on GeneChips were reorganized based on the latest genome and transcriptome information. In this particular case the Entrez Gene database (build: Jun 28, 2007) was used as source. For the CDF file based on Entrez Gene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon. more...
Organism:
Mus musculus
2 DataSets
15 Series
1 Related Platform
283 Samples
Download data: TAR
Platform
Accession:
GPL7546
ID:
100007546
2.

[Mouse430_2] Affymetrix GeneChip Mouse Genome 430 2.0 Array [Alternative CDF: affy9618alt]

(Submitter supplied) This is identical to GPL1261 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below.
Organism:
Mus musculus
1 DataSet
2 Series
1 Related Platform
36 Samples
Download data: CDF
Platform
Accession:
GPL9523
ID:
100009523
3.

Affymetrix GeneChip Mouse Genome 430 2.0 Array (CDF: Mouse4302_Mm_ENTREZG.cdf version 12.0.0)

(Submitter supplied) Custom CDF (Brainarray Entrez Gene v12.0.0) Protocol: see manufacturer's web site
Organism:
Mus musculus
1 DataSet
7 Series
1 Related Platform
87 Samples
Download data: CDF
Platform
Accession:
GPL9746
ID:
100009746
4.

Affymetrix Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_11.0.1]

(Submitter supplied) Custom CDF (Brainarray v11.0.1); Entrez Gene Protocol: GPL1261 using Entrez Gene custom CDF available from: http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/11.0.1/entrezg.download/mouse4302mmentrezgcdf_11.0.1.tar.gz
Organism:
Mus musculus
6 Series
1 Related Platform
53 Samples
Download data: CDF
Platform
Accession:
GPL8492
ID:
100008492
5.

[Mouse430_2_Mm_UG] Affymetrix GeneChip Mouse Genome 430 2.0 Array [Brainarray Version 9]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. After probe sequences are BLASTed against the latest UniGene Build and genome sequence, a series of filtering and grouping criteria are applied for different CDF files. A probe must hit only one genomic location. Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon; Protocol: This is identical to GPL1261 but a custom cdf environment was used to extract data. more...
Organism:
Mus musculus
2 Series
1 Related Platform
13 Samples
Download data: TAR
Platform
Accession:
GPL6526
ID:
100006526
6.

Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mm_ENTREZG_9]

(Submitter supplied) CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. Oligonucleotide probes on GeneChips were reorganized based on the latest genome and transcriptome information. In this particular case the Entrez Gene database (build: 05/04/2006) was used as source. For the CDF file based on Entrez Gene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set; Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon. more...
Organism:
Mus musculus
1 DataSet
1 Series
1 Related Platform
24 Samples
Download data: R, RD, RDA, TXT
Platform
Accession:
GPL5766
ID:
100005766
7.

Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mm430_Mm_REFSEQ_8]

(Submitter supplied) This identical to GPL1261 but a custom CDF environment was used to extract data. The custom CDF(Mm430_Mm_REFSEQ_8) was described by Dai et al., NAR 2005 33(20), PMID: 16284200. The cdf can be found at the link below. Protocol: see manufacturer's web site
Organism:
Mus musculus
1 DataSet
5 Series
1 Related Platform
49 Samples
Download data: TAR
Platform
Accession:
GPL5759
ID:
100005759
8.

[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mouse4302_Mm_ENTREZG Brainarray version 24.0.0]

(Submitter supplied) http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/24.0.0/entrezg.asp Protocol: This is identical to GPL1261 but a custom cdf environment was used to extract data. The cdf can be found at the link below.
Organism:
Mus musculus
1 Related Platform
Download data: CDF, TXT
Platform
Accession:
GPL29970
ID:
100029970
9.

[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array [Ensembl version 81]

(Submitter supplied) This is identical to GPL1261 but a custom CDF environment was used to extract data. Affymetrix probes were summarized and re-annotated with Ensembl gene names from the Ensembl July 2015 archive (Ensembl version 81). Protocol: See manufacturer's website.
Organism:
Mus musculus
1 Series
1 Related Platform
24 Samples
Download data
Platform
Accession:
GPL26724
ID:
100026724
10.

[Mouse4302_Mm_EntrezG] Affymetrix GeneChip Mouse Genome 430 2.0 Array [Mouse4302_Mm_ENTREZG_21.0.0]

(Submitter supplied) This is identical to GPL1261 but a custom CDF environment was used to extract data. [Brainarray Version 21, Mouse4302_Mm_ENTREZG_21.0.0].
Organism:
Mus musculus
4 Series
1 Related Platform
94 Samples
Download data: CDF, TXT
Platform
Accession:
GPL23097
ID:
100023097
11.

[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mouse4302_Mm_ENSG v19.0.0]

(Submitter supplied) This is identical to GPL1261 but a custom cdf environment was used to extract data. We used custom chip definition files (CDF) based on Ensembl gene annotation v19.
Organism:
Mus musculus
1 Series
1 Related Platform
8 Samples
Download data: CDF, TXT
Platform
Accession:
GPL22519
ID:
100022519
12.

[Mouse4302_Mm_ENSG] Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mouse4302_Mm_ENSG_17.0.0]

(Submitter supplied) This is identical to GPL1261 but a custom CDF environment was used to extract data [Brainarray Version 17, Mouse4302_Mm_ENSG_17.0.0].
Organism:
Mus musculus
2 Series
1 Related Platform
24 Samples
Download data: CDF, TXT
Platform
Accession:
GPL20766
ID:
100020766
13.

[Mouse4302_Mm_EntrezG] Affymetrix GeneChip Mouse Genome 430 2.0 Array [Mouse4302_Mm_ENTREZG_18.0.0]

(Submitter supplied) This is identical to GPL1261 but a custom CDF environment was used to extract data [Brainarray Version 18, Mouse4302_Mm_ENTREZG_18.0.0].
Organism:
Mus musculus
5 Series
1 Related Platform
344 Samples
Download data: CDF, TXT
Platform
Accession:
GPL19559
ID:
100019559
14.

Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mouse4302_Mm_REFSEQ v 16.0.0]

(Submitter supplied) This identical to GPL1261 but a custom CDF environment was used to extract data. The .cdf and mapping files are provided as supplementary files. Protocol: see manufacturer's web site
Organism:
Mus musculus
1 Series
1 Related Platform
18 Samples
Download data: CDF, TXT
Platform
Accession:
GPL18854
ID:
100018854
15.

[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mouse4302_Mm_ENTREZG.cdf Brainarray version 17.0.0]

(Submitter supplied) http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/17.0.0/entrezg.asp Protocol: This is identical to GPL1261 but a custom cdf environment was used to extract data. The cdf can be found at the link below.
Organism:
Mus musculus
5 Series
1 Related Platform
198 Samples
Download data: CDF, TXT
Platform
Accession:
GPL18615
ID:
100018615
16.

[Mouse430_2] Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: mouse4302daiplusv6cdf]

(Submitter supplied) Dai et al., NAR (2005), 33(20):e175 and de Leeuw et al.,BMC Res Notes. 2008; 1: 66
Organism:
Mus musculus
1 Series
1 Related Platform
97 Samples
Download data: CDF
Platform
Accession:
GPL16582
ID:
100016582
17.

[Mouse430_2_ENST_13.0.0] Affymetrix GeneChip Mouse Genome 430 2.0 Array [Brainarray Version 13]

(Submitter supplied) Based on Mouse430A2_Mm_ENST_13.0.0 CDF available from Brainarray: http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/13.0.0/enst.asp Protocol: see manufacturer's website
Organism:
Mus musculus
1 Series
1 Related Platform
12 Samples
Download data
Platform
Accession:
GPL18416
ID:
100018416
18.

[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array [CDF: Brainarray Mouse4302_Mm_ENTREZG_12.1.0]

(Submitter supplied) http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/12.1.0/entrezg.asp Protocol: This is identical to GPL1261 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below.
Organism:
Mus musculus
3 Series
1 Related Platform
36 Samples
Download data: CDF, TXT
Platform
Accession:
GPL18376
ID:
100018376
19.

[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (custom CDF)

(Submitter supplied) Alternative CDF's were generated by masking probes which showed non-specific hybridization towards mouse in the human arrays and vice versa. Briefly, using raw intensity signals from cel files, individual probes were filtered if they met the following criteria: the net intensity (PM-MM) of each probe pair from the cross-reactive species was less than 10 and greater than 50% of the corresponding signal from human tumor core. more...
Organism:
Mus musculus
1 Series
1 Related Platform
16 Samples
Download data: CDF
Platform
Accession:
GPL18122
ID:
100018122
20.

[Mouse4302_Mm_EntrezG] Affymetrix GeneChip Mouse Genome 430 2.0 Array [Brainarray Version 17.1.0]

(Submitter supplied) This is identical to GPL1261 but a custom CDF environment was used to extract data [Brainarray Version 17, Mouse4302_Mm_ENTREZG_17.1.0].
Organism:
Mus musculus
3 Series
1 Related Platform
22 Samples
Download data: CDF, TXT
Platform
Accession:
GPL18223
ID:
100018223
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db=gds|term=GPL1261[ACCN]%20AND%20gpl[ETYP]%20NOT%20100001261[uid]|query=1|qty=2|blobid=MCID_6144c6b75161e158771904c8|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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