GSE144747[Accession] - GEO DataSets - NCBI

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Items: 14

Select item 2001447471.

Kaposi’s Sarcoma-associated herpesvirus fine-tunes the temporal expression of its genes manipulating a specific host RNA quality control pathway

(Submitter supplied) Kaposi’s Sarcoma-associated herpesvirus (KSHV) transcripts are subject to degradation by at least two host-mediated nuclear RNA decay pathways, PABPN1 and PAPα/γ-mediated RNA decay (PPD) and an ARS2-dependent decay pathway. KSHV expresses the multifunctional protein ORF57, which increases viral transcripts stability by protecting them preferentially from ARS2-dependent decay. However, a subset of viral transcripts succumb to PPD even in the presence of ORF57, but the role of PPD during KSHV infection is not completely understood. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL16791
12 Samples

Download data: CSV

Series

Accession:: GSE144747

ID:: 200144747

PubMed Full text in PMC Similar studies Analyze with GEO2R SRA Run Selector

Select item 1000167912.

Illumina HiSeq 2500 (Homo sapiens)

Organism:: Homo sapiens

11831 Series
336741 Samples

Platform

Accession:: GPL16791

ID:: 100016791

Select item 3042950613.

siPAPα/γ_+_siARS2_Rep_3

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295061

ID:: 304295061

SRA Run Selector

Select item 3042950604.

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295060

ID:: 304295060

SRA Run Selector

Select item 3042950595.

siPAPα/γ_Rep_3

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295059

ID:: 304295059

SRA Run Selector

Select item 3042950586.

siControl_Rep_3

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295058

ID:: 304295058

SRA Run Selector

Select item 3042950577.

siPAPα/γ_+_siARS2_Rep_2

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295057

ID:: 304295057

SRA Run Selector

Select item 3042950568.

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295056

ID:: 304295056

SRA Run Selector

Select item 3042950559.

siPAPα/γ_Rep_2

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295055

ID:: 304295055

SRA Run Selector

Select item 30429505410.

siControl_Rep_2

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295054

ID:: 304295054

SRA Run Selector

Select item 30429505311.

siPAPα/γ_+_siARS2_Rep_1

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295053

ID:: 304295053

SRA Run Selector

Select item 30429505212.

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295052

ID:: 304295052

SRA Run Selector

Select item 30429505113.

siPAPα/γ_Rep_1

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295051

ID:: 304295051

SRA Run Selector

Select item 30429505014.

siControl_Rep_1

Organism:: Homo sapiens

Source name:: iSLK cells

Platform:: GPL16791
Series:: GSE144747

Sample

Accession:: GSM4295050

ID:: 304295050

SRA Run Selector

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