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Items: 17

1.

RNA Profiling of FAC-Sorted Neurons From the Developing Zebrafish Spinal Cord.

(Submitter supplied) In this report, we describe a successful protocol for isolating and expression-profiling live fluorescent- protein-labelled neurons from zebrafish embryos. As a proof-of-principle for this method, we FAC-sorted and RNA-profiled GFP-labelled spinal CiA interneurons and compared the expression profile of these cells to those of post-mitotic spinal neurons in general and to all trunk cells. We show that RNA of sufficient quality and quantity to uncover both expected and novel transcription profiles via Affymetrix microarray analysis can be extracted from 5,700 to 20,000 FAC-sorted cells. more...
Organism:
Danio rerio
Type:
Expression profiling by array
Platform:
GPL1319
15 Samples
Download data: CEL
Series
Accession:
GSE145916
ID:
200145916
2.

[Zebrafish] Affymetrix Zebrafish Genome Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/projects/geo/info/geo_affy.html The Affymetrix GeneChip Zebrafish Genome Array can be used to study gene expression of over 14,900 Danio rerio transcripts. Sequence information for this array was selected from the following public data sources: RefSeq (July 2003), GenBank (release 136.0, June 2003), dbEST (July 2003), and UniGene (Build 54, June 2003). more...
Organism:
Danio rerio
18 DataSets
133 Series
1 Related Platform
1558 Samples
Download data
Platform
Accession:
GPL1319
ID:
100001319
3.

Trunk - 27 hpf - Replicate 4

Organism:
Danio rerio
Source name:
All trunk cells, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339288
ID:
304339288
4.

Trunk - 27 hpf - Replicate 3

Organism:
Danio rerio
Source name:
All trunk cells, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339287
ID:
304339287
5.

Trunk - 27 hpf - Replicate 2

Organism:
Danio rerio
Source name:
All trunk cells, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339286
ID:
304339286
6.

Trunk - 27 hpf - Replicate 1

Organism:
Danio rerio
Source name:
All trunk cells, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339285
ID:
304339285
7.

CiA - 27 hpf - Replicate 6

Organism:
Danio rerio
Source name:
CiA (V1) interneurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339284
ID:
304339284
8.

CiA - 27 hpf - Replicate 5

Organism:
Danio rerio
Source name:
CiA (V1) interneurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339283
ID:
304339283
9.

CiA - 27 hpf - Replicate 4

Organism:
Danio rerio
Source name:
CiA (V1) interneurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339282
ID:
304339282
10.

CiA - 27 hpf - Replicate 3

Organism:
Danio rerio
Source name:
CiA (V1) interneurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339281
ID:
304339281
11.

CiA - 27 hpf - Replicate 2

Organism:
Danio rerio
Source name:
CiA (V1) interneurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339280
ID:
304339280
12.

CiA - 27 hpf - Replicate 1

Organism:
Danio rerio
Source name:
CiA (V1) interneurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339279
ID:
304339279
13.

All Spinal Neurons - 27 hpf - Replicate 5

Organism:
Danio rerio
Source name:
All spinal neurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339278
ID:
304339278
14.

All Spinal Neurons - 27 hpf - Replicate 4

Organism:
Danio rerio
Source name:
All spinal neurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339277
ID:
304339277
15.

All Spinal Neurons - 27 hpf - Replicate 3

Organism:
Danio rerio
Source name:
All spinal neurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339276
ID:
304339276
16.

All Spinal Neurons - 27 hpf - Replicate 2

Organism:
Danio rerio
Source name:
All spinal neurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339275
ID:
304339275
17.

All Spinal Neurons - 27 hpf - Replicate 1

Organism:
Danio rerio
Source name:
All spinal neurons, 27 hpf
Platform:
GPL1319
Series:
GSE145916
Download data: CEL
Sample
Accession:
GSM4339274
ID:
304339274
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