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Items: 10

1.

A single cell RNA-seq resource for early sea urchin development

(Submitter supplied) Here we leverage the sea urchin embryo for its rich history of developmental transitions, its well-established gene regulatory network, and the ability to readily dissociate embryos into single cells to interrogate the embryo by single cell RNA-seq. We tested eight developmental stages in S. purpuratus, from the eight-cell stage to late in gastrulation. The analysis revealed cell types derived from the abundant cells of the three germ layers as well as the rare cells of the germline. more...
Organism:
Strongylocentrotus purpuratus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL28450
8 Samples
Download data: MTX, RDS, TSV
Series
Accession:
GSE149221
ID:
200149221
2.

Illumina HiSeq 4000 (Strongylocentrotus purpuratus)

Organism:
Strongylocentrotus purpuratus
4 Series
15 Samples
Download data
Platform
Accession:
GPL28450
ID:
100028450
3.

SpLG: late gastrula

Organism:
Strongylocentrotus purpuratus
Source name:
single cell mRNA
Platform:
GPL28450
Series:
GSE149221
Download data: MTX, TSV
Sample
Accession:
GSM4494545
ID:
304494545
4.

SpEG: early gastrula

Organism:
Strongylocentrotus purpuratus
Source name:
single cell mRNA
Platform:
GPL28450
Series:
GSE149221
Download data: MTX, TSV
Sample
Accession:
GSM4494544
ID:
304494544
5.

SpMB: mesenchyme blastula stage

Organism:
Strongylocentrotus purpuratus
Source name:
single cell mRNA
Platform:
GPL28450
Series:
GSE149221
Download data: MTX, TSV
Sample
Accession:
GSM4494543
ID:
304494543
6.

SpHB: hatched blastula stage

Organism:
Strongylocentrotus purpuratus
Source name:
single cell mRNA
Platform:
GPL28450
Series:
GSE149221
Download data: MTX, TSV
Sample
Accession:
GSM4494542
ID:
304494542
7.

SpEB: early blastula stage

Organism:
Strongylocentrotus purpuratus
Source name:
single cell mRNA
Platform:
GPL28450
Series:
GSE149221
Download data: MTX, TSV
Sample
Accession:
GSM4494541
ID:
304494541
8.

Sp3: morula stage

Organism:
Strongylocentrotus purpuratus
Source name:
single cell mRNA
Platform:
GPL28450
Series:
GSE149221
Download data: MTX, TSV
Sample
Accession:
GSM4494540
ID:
304494540
9.

Sp2: 64-cell stage

Organism:
Strongylocentrotus purpuratus
Source name:
single cell mRNA
Platform:
GPL28450
Series:
GSE149221
Download data: MTX, TSV
Sample
Accession:
GSM4494539
ID:
304494539
10.

Sp1: 8-cell stage

Organism:
Strongylocentrotus purpuratus
Source name:
single cell mRNA
Platform:
GPL28450
Series:
GSE149221
Download data: MTX, TSV
Sample
Accession:
GSM4494538
ID:
304494538
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Supplemental Content

db=gds|term=GSE149221[Accession]|query=1|qty=2|blobid=MCID_663427193ac0d96fcb50ac60|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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