GSE30540[Accession] - GEO DataSets - NCBI

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Select item 2000305401.

A new classification of chromosome instability (CIN) phenotype, CIN-high and CIN-low

(Submitter supplied) Samples were taken from colorectal cancers in surgically resected specimens in 35 colorectal cancer patients. The expression profiles were determined using Affymetrix Human Genome U133 Plus 2.0 arrays. Comparison between the sample groups allow to identify a set of discriminating genes that can be used for molecular markers for CIN phynotype.

Organism:: Homo sapiens

Type:: Expression profiling by array

Dataset:: GDS4380
Platform:: GPL570
35 Samples

Download data: CEL

Series

Accession:: GSE30540

ID:: 200030540

PubMed Similar studies Analyze with GEO2R

Select item 43802.

Full record GDS4380

High and low chromosomal instability phenotypes in stage II and III colorectal cancers

Analysis of specimens from consecutive stage II and stage III colorectal cancer (CRC) patients with high or low chromosomal instability (CIN) phenotype. CIN-high CRC showed poorer outcome than CIN-low CRC. Results provide insight into molecular biomarkers to distinguish between the CIN phenotypes.

Organism:: Homo sapiens

Type:: Expression profiling by array, transformed count, 2 genotype/variation sets

Platform:: GPL570
Series:: GSE30540
35 Samples

Download data: CEL

DataSet

Accession:: GDS4380

ID:: 4380

PubMed Similar studies GEO Profiles Analyze DataSet

Select item 1000005703.

[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 06, 2012: annotation table updated with netaffx build 32 June 23, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site Complete coverage of the Human Genome U133 Set plus 6,500 additional genes for analysis of over 47,000 transcripts All probe sets represented on the GeneChip Human Genome U133 Set are identically replicated on the GeneChip Human Genome U133 Plus 2.0 Array. more...

Organism:: Homo sapiens

602 DataSets
5643 Series
61 Related Platforms
171150 Samples

Platform

Accession:: GPL570

ID:: 100000570

Select item 3007577474.

Expression data of 145_ACa

Organism:: Homo sapiens

Source name:: Patient 145

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757747

ID:: 300757747

Select item 3007577465.

Expression data of 46_RCa

Organism:: Homo sapiens

Source name:: Patient 46

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757746

ID:: 300757746

Select item 3007577456.

Expression data of 60_RCa

Organism:: Homo sapiens

Source name:: Patient 60

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757745

ID:: 300757745

Select item 3007577447.

Expression data of 185_Ca

Organism:: Homo sapiens

Source name:: Patient 185

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757744

ID:: 300757744

Select item 3007577438.

Expression data of 180_SCa

Organism:: Homo sapiens

Source name:: Patient 180

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757743

ID:: 300757743

Select item 3007577429.

Expression data of 1_Ca

Organism:: Homo sapiens

Source name:: Patient 1

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757742

ID:: 300757742

Select item 30075774110.

Expression data of 158_TCa

Organism:: Homo sapiens

Source name:: Patient 158

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757741

ID:: 300757741

Select item 30075774011.

Expression data of 178_Ca

Organism:: Homo sapiens

Source name:: Patient 178

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757740

ID:: 300757740

Select item 30075773912.

Expression data of 265_RCa

Organism:: Homo sapiens

Source name:: Patient 265

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757739

ID:: 300757739

Select item 30075773813.

Expression data of 215_ACa

Organism:: Homo sapiens

Source name:: Patient 215

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757738

ID:: 300757738

Select item 30075773714.

Expression data of 384_RCa

Organism:: Homo sapiens

Source name:: Patient 384

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757737

ID:: 300757737

Select item 30075773615.

Expression data of 73SCa

Organism:: Homo sapiens

Source name:: Patient 73

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757736

ID:: 300757736

Select item 30075773516.

Expression data of 61_ACa

Organism:: Homo sapiens

Source name:: Patient 61

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757735

ID:: 300757735

Select item 30075773417.

Expression data of 218SCa

Organism:: Homo sapiens

Source name:: Patient 218

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757734

ID:: 300757734

Select item 30075773318.

Expression data of 45_ACa

Organism:: Homo sapiens

Source name:: Patient 45

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757733

ID:: 300757733

Select item 30075773219.

Expression data of 181_RCa

Organism:: Homo sapiens

Source name:: Patient 181

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757732

ID:: 300757732

Select item 30075773120.

Expression data of 79_Ca_2

Organism:: Homo sapiens

Source name:: Patient 79

Platform:: GPL570
Series:: GSE30540
Dataset:: GDS4380

Download data: CEL

Sample

Accession:: GSM757731

ID:: 300757731

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