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1.

A Cell Epigenotype Specific Model for the Correction of Cellular Heterogeneity in the Brain

(Submitter supplied) Cellular heterogeneity may bias cell type specific epigenetic patterns leading to a dramatic increase in false positive or negative findings in psychiatric epigenetic studies. To address this issue, we performed fluorescence activated cell sorting (FACS) of neuronal nuclei in post mortem frontal cortex 58 samples followed by Illumina HM450 microarray based DNA methylation profiling. We characterized the extent of neuron and glia specific DNA methylation variation independent of disease status and identified significant cell type specific epigenetic variation at 51% of loci.
Organism:
Homo sapiens
Type:
Methylation profiling by array
Platform:
GPL13534
145 Samples
Download data: TXT
Series
Accession:
GSE41826
ID:
200041826
2.

Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)

(Submitter supplied) 1 difference between HumanMethylation450_15017482_v.1.1.bpm and HumanMethylation450_15017482_v.1.2.bpm: 1.1: 41636384,NEGATIVE,-99,Negative 604 1.2: 41636384,RESTORATION,Green,Restore Protocol: See manufacturer's website
Organism:
Homo sapiens
1669 Series
1 Related Platform
117761 Samples
Download data: BPM, CSV, TXT, XLSX
Platform
Accession:
GPL13534
ID:
100013534
3.

bulk 454

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025018
ID:
301025018
4.

bulk 5239

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025016
ID:
301025016
5.

bulk 1103

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025015
ID:
301025015
6.

bulk 1228

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025014
ID:
301025014
7.

bulk 5175

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025013
ID:
301025013
8.

bulk 5444

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025012
ID:
301025012
9.

bulk 5234

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025011
ID:
301025011
10.

bulk 1115

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025010
ID:
301025010
11.

bulk 1363

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025009
ID:
301025009
12.

bulk 4636

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025008
ID:
301025008
13.

bulk 1944

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025007
ID:
301025007
14.

bulk 720

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025006
ID:
301025006
15.

bulk 1269

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025005
ID:
301025005
16.

bulk 1551

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025004
ID:
301025004
17.

bulk 1613

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025003
ID:
301025003
18.

bulk 4643

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025002
ID:
301025002
19.

bulk 1112

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025001
ID:
301025001
20.

bulk 1230

Organism:
Homo sapiens
Source name:
post mortem frontal cortex
Platform:
GPL13534
Series:
GSE41826
Download data
Sample
Accession:
GSM1025000
ID:
301025000
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