GSE44902[Accession] - GEO DataSets - NCBI

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Items: 12

Select item 2000449021.

NKX2-5 mutations causative for congenital heart disease retain functionality and are directed to hundreds of targets

(Submitter supplied) NKX2-5 is a homeodomain transcription factor that plays a central role in the cardiac gene regulatory network, and is commonly mutated in human congenital heart disease. Here, we take a functional genomics approach to congenital heart disease mechanism. We used DamID to establish a robust set of target genes for both wild type NKX2-5 and a mutation lacking the homeodomain (NKX2-5delHD), the latter to model loss-of-function in gene regulatory network. more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by genome tiling array

Platform:: GPL5811
10 Samples

Download data: BED, CEL, COD

Series

Accession:: GSE44902

ID:: 200044902

PubMed Full text in PMC Similar studies

Select item 1000058112.

[Mm_PromPR] Affymetrix Mouse Promoter 1.0R Array

(Submitter supplied) The GeneChip® Mouse Promoter 1.0R Array is designed for chromatin immunoprecipitation (ChIP) experiments. The Mouse Promoter 1.0R Array is a single array comprised of over 4.6 million probes tiled to interrogate over 28,000 mouse promoter regions. Sequences used in the design of the Mouse Promoter 1.0R Array were selected from NCBI mouse genome assembly (version 33). Repetitive elements were removed by RepeatMasker. more...

Organism:: Mus musculus

67 Series
469 Samples

Platform

Accession:: GPL5811

ID:: 100005811

Select item 3013284673.

damNKX2-5YRD^(Y-A)

Organism:: Mus musculus

Source name:: dam-NKX2-5YRD^(Y-A) DamID DNA from HL1 cells (experiment #3) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #2) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1328467

ID:: 301328467

Select item 3013284664.

damNKX2-5(repeat)

Organism:: Mus musculus

Source name:: dam-NKX2-5 DamID DNA from HL1 cells (experiment #3) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #2) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1328466

ID:: 301328466

Select item 3010936395.

Organism:: Mus musculus

Source name:: SRF-dam DamID DNA from HL1 cells (experiment #1) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #1) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1093639

ID:: 301093639

Select item 3010936386.

Organism:: Mus musculus

Source name:: dam-SRF DamID DNA from HL1 cells (experiment #1) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #1) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1093638

ID:: 301093638

Select item 3010936367.

Organism:: Mus musculus

Source name:: dam-NKX2-5ΔHD DamID DNA from HL1 cells (experiment #2) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #2) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1093636

ID:: 301093636

Select item 3010936348.

Organism:: Mus musculus

Source name:: dam-NKX2-5 DamID DNA from HL1 cells (experiment #2) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #2) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1093634

ID:: 301093634

Select item 3010936339.

Organism:: Mus musculus

Source name:: ELK4-dam DamID DNA from HL1 cells (experiment #1) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #1) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1093633

ID:: 301093633

Select item 30109363210.

Organism:: Mus musculus

Source name:: dam-ELK4 DamID DNA from HL1 cells (experiment #1) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #1) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1093632

ID:: 301093632

Select item 30109363111.

Organism:: Mus musculus

Source name:: ELK1-dam DamID DNA from HL1 cells (experiment #1) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #1) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1093631

ID:: 301093631

Select item 30109363012.

Organism:: Mus musculus

Source name:: dam-ELK1 DamID DNA from HL1 cells (experiment #1) (channel 1) dam-ONLY DamID DNA from HL1 cells (experiment #1) (channel 2)

Platform:: GPL5811
Series:: GSE44902

Download data: CEL, COD

Sample

Accession:: GSM1093630

ID:: 301093630

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