GSE50243[Accession] - GEO DataSets - NCBI

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Items: 20

Select item 2000502431.

FOXO3 selectively amplifies enhancer activity to establish target gene regulation.

(Submitter supplied) Forkhead Box O (FOXO) transcription factors are versatile players in diverse cellular processes, affecting tumorigenesis, metabolism, stem cell maintenance and lifespan. To understand the transcriptional output of FOXO3 activation, we investigate features that define the subset of enhancer binding events that actually contribute to gene regulation. We show FOXO3 transcriptional output is determined by the amount of bound FOXO3, which in turn is determined by motif presence, pre-existing enhancer activity and accessibility. more...

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing

Platform:: GPL16288
18 Samples

Download data: BED, RPKM

Series

Accession:: GSE50243

ID:: 200050243

PubMed Similar studies SRA Run Selector

Select item 1000162882.

AB 5500xl Genetic Analyzer (Homo sapiens)

Organism:: Homo sapiens

70 Series
1301 Samples

Platform

Accession:: GPL16288

ID:: 100016288

Select item 3012167523.

RNA_R_DL23_nt_Rep2

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: RPKM

Sample

Accession:: GSM1216752

ID:: 301216752

SRA Run Selector

Select item 3012167514.

RNA_R_DL23_nt_Rep1

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: RPKM

Sample

Accession:: GSM1216751

ID:: 301216751

SRA Run Selector

Select item 3012167505.

RNA_R_DL23_4OHT8h_Rep2

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: RPKM

Sample

Accession:: GSM1216750

ID:: 301216750

SRA Run Selector

Select item 3012167496.

RNA_R_DL23_4OHT8h_Rep1

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: RPKM

Sample

Accession:: GSM1216749

ID:: 301216749

SRA Run Selector

Select item 3012167487.

RNA_DL23_nt_Rep2

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: RPKM

Sample

Accession:: GSM1216748

ID:: 301216748

SRA Run Selector

Select item 3012167478.

RNA_DL23_nt_Rep1

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: RPKM

Sample

Accession:: GSM1216747

ID:: 301216747

SRA Run Selector

Select item 3012167469.

RNA_DL23_4OHT_8h_Rep2

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: RPKM

Sample

Accession:: GSM1216746

ID:: 301216746

SRA Run Selector

Select item 30121674510.

RNA_DL23_4OHT_8h_Rep1

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: RPKM

Sample

Accession:: GSM1216745

ID:: 301216745

SRA Run Selector

Select item 30121674411.

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216744

ID:: 301216744

SRA Run Selector

Select item 30121674312.

CHIP_DL23_VIII_4h_H3K27ac

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216743

ID:: 301216743

SRA Run Selector

Select item 30121674213.

CHIP_DL23_nt_H3_H3K4me3

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216742

ID:: 301216742

SRA Run Selector

Select item 30121674114.

CHIP_DL23_nt_H3_H3K4me1

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216741

ID:: 301216741

SRA Run Selector

Select item 30121674015.

CHIP_DL23_nt_H3_H3K27ac

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216740

ID:: 301216740

SRA Run Selector

Select item 30121673916.

CHIP_DL23_nt_H3

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216739

ID:: 301216739

SRA Run Selector

Select item 30121673817.

CHIP_DL23_4OHT_4h_H3K4me3

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216738

ID:: 301216738

SRA Run Selector

Select item 30121673718.

CHIP_DL23_4OHT_4h_H3K4me1

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216737

ID:: 301216737

SRA Run Selector

Select item 30121673619.

CHIP_DL23_4OHT_4h_H3K27ac

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216736

ID:: 301216736

SRA Run Selector

Select item 30121673520.

CHIP_DL23_4OHT_4h_H3

Organism:: Homo sapiens

Source name:: DL23 cell line with pcDNA3-HA-FOXO33-ER

Platform:: GPL16288
Series:: GSE50243

Download data: BED

Sample

Accession:: GSM1216735

ID:: 301216735

SRA Run Selector

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