GSE8349[Accession] - GEO DataSets

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Select item 2000083491.

Microarray platform comparison study of hippocampal gene expression in DCLK1 transgenic and wild-type mice

(Submitter supplied) The aim of the present study was to compare, on a statistical basis, the performance of different microarray platforms to detect differences in gene expression in a realistic and challenging biological setting. Gene expression profiles in the hippocampus of five wild-type and five transgenic δC-doublecortin-like kinase mice were evaluated with five microarray platforms: Applied Biosystems, Affymetrix, Agilent, Illumina and home-spotted oligonucleotide arrays. more...

Organism:: Mus musculus

Type:: Expression profiling by array

5 related Platforms
50 Samples

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Series

Accession:: GSE8349

ID:: 200008349

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000012612.

[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 2012: annotation table updated with netaffx build 32 June 23, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site All probe sets represented on the GeneChip Mouse Expression Set 430 are included on the GeneChip Mouse Genome 430 2.0 Array. more...

Organism:: Mus musculus

601 DataSets
4537 Series
40 Related Platforms
58847 Samples

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Platform

Accession:: GPL1261

ID:: 100001261

Select item 1000042343.

Sentrix Mouse-6 Expression BeadChip

(Submitter supplied) The Sentrix Mouse-6 BeadChip can be used to study expression of over 47,000 mouse transcripts based on MEEBO, RefSeq and RIKEN FANTOM2 content. researchers can generate whole-genome expression profiles for 6 samples in parallel on a single BeadChip. Each array is composed of 3 micron features with average feature redundancy of 30-fold . All features are QCed by a sequential hybridization process called array decoding. more...

Organism:: Mus musculus

4 DataSets
17 Series
303 Samples

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Platform

Accession:: GPL4234

ID:: 100004234

Select item 1000029954.

ABI Mouse Genome Survey Microarray

(Submitter supplied) See manufacturer's web site Protocol: See manufacturer's web site

Organism:: Mus musculus

4 DataSets
47 Series
543 Samples

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Platform

Accession:: GPL2995

ID:: 100002995

Select item 1000028725.

Agilent-012694 Whole Mouse Genome G4122A (Feature Number version)

(Submitter supplied) Designed to truly represent all known genes in the mouse genome and their resulting transcripts, Agilent's Whole Mouse Genome Oligo microarray is comprised of 41,534 60-mer oligonucleotide probes representing over 41,000 mouse genes and transcripts. Content for this microarray was generated from leading public databases, including RefSeq, RIKEN, NIA, Ensembl, RIKEN, UCSC Goldenpath, and Unigene. Arrays of this design have barcodes that begin with 16012694 or 2512694. more...