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Items: 3

1.

Escherichia coli Lrp regulates one-third of the genome via direct, cooperative, and indirect paths

(Submitter supplied) The global regulator Lrp plays a crucial role in regulating metabolism, virulence and motility in response to environmental conditions.  Lrp has previously been shown to activate or repress approximately 10% of genes in Escherichia coli.  However, the full spectrum of targets, and how Lrp acts to regulate them, has stymied earlier study.  We have combined matched ChIP-seq and RNA sequencing under nine physiological conditions to map the binding and regulatory activity of Lrp as it directs responses to nutrient abundance. more...
Organism:
Escherichia coli
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platform:
GPL21222
108 Samples
Download data: TSV
Series
Accession:
GSE111874
ID:
200111874
2.

Illumina NextSeq 500 (Escherichia coli)

Organism:
Escherichia coli
117 Series
2116 Samples
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Platform
Accession:
GPL21222
ID:
100021222
3.

WT Rich transition point rep2-ChIPseq input

Organism:
Escherichia coli
Source name:
Culture lysate
Platform:
GPL21222
Series:
GSE111874
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Sample
Accession:
GSM3043102
ID:
303043102
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db=gds|term=GSM3043102[Accession]|query=1|qty=2|blobid=MCID_66598d73e795547e5f2a20f2|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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