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Items: 4

1.

Pericentromeric hypomethylation elicits an interferon response in an animal model of ICF syndrome [dsRNA-seq]

(Submitter supplied) The goal of this study was to investigate DNA methylation and gene expression changes in a zebrafish model of ICF Syndrome which were generated by mutation of ICF-gene zbtb24. Comparison of gene expression changes between wildtype and zbtb24 homozygous mutants revealed upregulation of interferon response genes following zbtb24 deletion. Upregulation of interferon response genes was blocked by mutation of the dsRNA helicase Mda5.
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18413
12 Samples
Download data: TXT
Series
Accession:
GSE116359
ID:
200116359

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Pericentromeric hypomethylation elicits an interferon response in an animal model of ICF syndrome

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Danio rerio
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL18413 GPL14875
23 Samples
Download data: TXT
Series
Accession:
GSE116360
ID:
200116360

PubMed Full text in PMC Similar studies

3.

Illumina HiSeq 2500 (Danio rerio)

Organism:
Danio rerio
402 Series
7022 Samples
Download data
Platform
Accession:
GPL18413
ID:
100018413

4.

ifih1Mu_z24WT_3

Organism:
Danio rerio
Source name:
Fin
Platform:
GPL18413
Series:
GSE116359 GSE116360
Download data
Sample
Accession:
GSM3229940
ID:
303229940

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db=gds|term=GSM3229940[Accession]|query=1|qty=2|blobid=MCID_664752def63069282723e066|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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