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Items: 3

1.

mSWI/SNF functional genomic characterization of SMARCB1 mutants in SMARCB1-null and heterozygous settings

(Submitter supplied) Chromatin remodeling complexes regulate gene expression by shifting, evicting, and exchanging nucleosomes along the chromosomes of eukaryotic organisms. The mammalian SWI/SNF chromatin remodeling complex (mSWI/SNF or BAF) is mutated in over 20% of human cancers and loss of the SMARCB1 gene, encoding the BAF47 protein subunit, results in one of the most aggressive and lethal pediatric cancers. An accumulation of point mutations occurs at the C-terminal end of the protein, for which the functional ramifications are unknown. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL24676 GPL18573
102 Samples
Download data: BW
Series
Accession:
GSE124903
ID:
200124903
2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

TTC1240_ChIP_N106_SMARCB1_K364del_DPF2

Organism:
Homo sapiens
Source name:
tumor cell line
Platform:
GPL18573
Series:
GSE124903
Download data: BW
Sample
Accession:
GSM3580470
ID:
303580470
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db=gds|term=GSM3580470[Accession]|query=1|qty=2|blobid=MCID_6667834bbb845b085b2bca05|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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