GSM404589[Accession] - GEO DataSets

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Items: 4

Select item 2000163751.

Uncovering early response of gene regulatory networks in ES cells by systematic induction of transcription factors

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Mus musculus

Type:: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL6867 GPL9185
342 Samples

Download data: TXT

Series

Accession:: GSE16375

ID:: 200016375

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000161482.

Timed induction of 10 transcription factors - ES time series data

(Submitter supplied) To decipher the structure and behaviors of the transcription factor (TF) network, we created 50 permanent mouse ES cell lines, in each of which one of the 50 transcription factors tagged with FLAG, is inserted into the doxycycline (dox)-repressible ROSA26 locus. We have obtained time series data for 10 of the transcripts at 24h,48h and 72hr. Expression profiling reveals Cdx2 as the most potent inducer of transcriptome perturbation in ES cells, followed by Esx1, Sox9, Tcf3, Klf4, and Gata3. more...

Organism:: Mus musculus

Type:: Expression profiling by array

Platform:: GPL6867
124 Samples

Download data: TXT

Series

Accession:: GSE16148

ID:: 200016148

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000068673.

NIA Mouse 44K Microarray v3.0 (Whole Genome 60-mer Oligo) [Agilent 015087]

(Submitter supplied) The Agilent's Mouse Development Oligo Microarray 3.0 is in 4x44K HD format on a glass slide. Each 43,451-feature microarray contains 41,999 (60-mer) probes representing all empirical and predicted mouse genes and transcripts based on NIA Mouse Gene Index. The annotation is based on NCBI Mouse RefSeq and GeneBank mRNA searches. A set of synthetic spike-in control probes are included to control variations in target labeling and hybridization, and to provide more quantitative information on transcripts. more...