GSM4932629[Accession] - GEO DataSets - NCBI

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Items: 3

Select item 2001620701.

RNAseq and quantitative proteomic analysis of Dictyostelium knock-out cells lacking the core autophagy proteins ATG9 and/or ATG16

(Submitter supplied) Purpose: Global survey of the transcriptome and comparison to the proteome in autophagy-deficient strains of D. discoideum. Results: Our RNAseq analysis of ATG9‾, ATG16‾ and ATG9‾/16‾ cells revealed major transcriptional changes in a large number of genes in comparison to AX2. Conclusions: Our study provides the first combined transcriptome and proteome analysis of ATG9‾, ATG16‾ and ATG9‾/16‾ cells and adds to our knowledge of functions of these proteins in Dictyostelium discoideum.

Organism:: Dictyostelium discoideum

Type:: Expression profiling by high throughput sequencing

Platform:: GPL15643
36 Samples

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Series

Accession:: GSE162070

ID:: 200162070

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000156432.

Illumina HiSeq 2000 (Dictyostelium discoideum)

Organism:: Dictyostelium discoideum

7 Series
89 Samples

Platform

Accession:: GPL15643

ID:: 100015643

Select item 3049326293.

Organism:: Dictyostelium discoideum

Source name:: D. discoideum cells

Platform:: GPL15643
Series:: GSE162070

Sample

Accession:: GSM4932629

ID:: 304932629

SRA Run Selector

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