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Items: 3

1.

RNA/WES/ATAC/scRNA sequencing of murine melanoma primary and LN metastases

(Submitter supplied) The purpose of this study is to identify transcriptional, mutational, andepigenetic differences between LN metastases from primary tumors. Using in vivo serial passaging of the minimally metastatic syngeneic murine melanoma cell line B16-F0, we have generated nearly 300 unique cell lines spanning nine generations of in vivo passaging, derived from LNs, and exhibiting varying degrees of metastatic potential to LNs. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL17021 GPL21103 GPL24247
58 Samples
Download data: BW, MTX, TSV, TXT
Series
Accession:
GSE117529
ID:
200117529

SRA Run Selector

2.

Illumina NovaSeq 6000 (Mus musculus)

Organism:
Mus musculus
12194 Series
664638 Samples
Download data
Platform
Accession:
GPL24247
ID:
100024247

3.

B16-F0 #4 ATAC

Organism:
Mus musculus
Source name:
melanoma cell line
Platform:
GPL24247
Series:
GSE117529
Download data: BW
Sample
Accession:
GSM5983266
ID:
305983266

SRA Run Selector

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db=gds|term=GSM5983266[Accession]|query=1|qty=2|blobid=MCID_666b0d4d6e9d376f2311bb1b|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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