GEO DataSets

(Submitter supplied) Plant virus infection involves the production of viral small RNAs (vsRNAs) with the potential to associate with distinct Argonaute (AGO)-containing silencing complexes and mediate diverse silencing effects on RNA and chromatin. We used multiplexed, high-throughput pyrosequencing to profile populations of vsRNAs from plants infected with viruses from different genera. Sense and antisense vsRNAs of 20 to 24 nucleotides (nts) spread throughout the entire viral genomes in an overlapping configuration; virtually all genomic nucleotide positions were represented in the dataset. more...

Organism:

Tobacco rattle virus; Watermelon mosaic virus; Tomato yellow leaf curl virus; Cymbidium ringspot virus; Pepper mild mottle virus; Melon necrotic spot virus; Potato virus X; Turnip mosaic virus; Cucumber mosaic virus

Type:

Non-coding RNA profiling by high throughput sequencing

9 related Platforms

10 Samples

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