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Items: 1 to 20 of 46

1.

Evolution of neuronal cell classes and types in the vertebrate retina

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens; Sus scrofa domesticus; Rhabdomys pumilio; Mustela putorius furo; Bos taurus; Anolis sagrei; Ictidomys tridecemlineatus; Danio rerio; Didelphis marsupialis; Peromyscus maniculatus; Tupaia chinensis; Callithrix jacchus; Ovis aries
Type:
Expression profiling by high throughput sequencing
13 related Platforms
118 Samples
Download data
Series
Accession:
GSE237215
ID:
200237215
2.

Evolution of neuronal cell classes and types in the vertebrate retina [Tree_Shrew]

(Submitter supplied) The basic plan of the retina is conserved across vertebrates, yet species differ profoundly in their visual needs (Baden et al., 2020). One might expect that retinal cell types evolved to accommodate these varied needs, but this has not been systematically studied. Here, we generated and integrated single-cell transcriptomic atlases of the retina from 17 species: humans, two non-human primates, four rodents, three ungulates, opossum, ferret, tree shrew, a teleost fish, a bird, a reptile and a lamprey. more...
Organism:
Tupaia chinensis
Type:
Expression profiling by high throughput sequencing
Platform:
GPL33302
8 Samples
Download data: CSV
Series
Accession:
GSE237213
ID:
200237213
3.

Characterization of long-term ex vivo expansion of tree shrew spermatogonial stem cells

(Submitter supplied) Purpose: The goals of this study are to clarify influence of long-term expansion on the spermatogenesis potential of tree shrew spermatogonial stem cells (SSCs)
Organism:
Tupaia chinensis
Type:
Expression profiling by high throughput sequencing
Platform:
GPL33302
12 Samples
Download data: TXT
Series
Accession:
GSE228744
ID:
200228744
4.

Identification of Driver Mutations for Induction of Pancreatic Cancer from Adult Tree Shrew (Tupaia belangeri chinensis) Acinar Cells

(Submitter supplied) To investigate gene expression in the tree shrew pancreatic cancer model, tumor samples were analyzed by RNA-seq and the expression profiles were compared to those of human pancreatic cancer samples (n = 30) containing KRAS, TP53, and CDKN2A/B mutations downloaded from The Cancer Genome Atlas (https://tcga-data.nci.nih.gov/) and mouse pancreatic cancer (accession no. GSE87388), which showed similar histological features
Organism:
Tupaia chinensis
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24618
3 Samples
Download data
Series
Accession:
GSE106343
ID:
200106343
5.

Transcriptome analysis of the treeshrew infected with ZIKV GZ01

(Submitter supplied) We analyzed the gene expression profile of the PBMC from -2dpi, 2dpi, and 6dpi ZIKV-infected treeshrew
Organism:
Tupaia chinensis
Type:
Expression profiling by high throughput sequencing
Platform:
GPL25059
6 Samples
Download data: XLS, XLSX
Series
Accession:
GSE115093
ID:
200115093
6.

Transcriptome sequencing of Chinese tree shrew, Tupaia belangeri chinensis

(Submitter supplied) Deep sequencing of mRNA from Chinese tree shrew; Chinese tree shrew (Tupaia belangeri chinensis) is placed in Order Scandentia and embraces many unique features for a good experimental animal model. Currently, there are many attempts to employ tree shrew to establish model for a variety of human disorders such as social stress, myopia, HCV and HBV infection, and hepatocellular carcinoma .We present here a publicly available annotated genome sequence for Chinese tree shrew. more...
Organism:
Tupaia chinensis
Type:
Expression profiling by high throughput sequencing
Platform:
GPL15772
7 Samples
Download data: BEDGRAPH
Series
Accession:
GSE39150
ID:
200039150
7.

Illumina NovaSeq 6000 (Tupaia chinensis)

Organism:
Tupaia chinensis
3 Series
20 Samples
Download data
Platform
Accession:
GPL33302
ID:
100033302
8.

Illumina HiSeq 2500 (Tupaia chinensis)

Organism:
Tupaia chinensis
1 Series
6 Samples
Download data
Platform
Accession:
GPL25059
ID:
100025059
9.

Illumina HiSeq 4000 (Tupaia chinensis)

Organism:
Tupaia chinensis
1 Series
3 Samples
Download data
Platform
Accession:
GPL24618
ID:
100024618
10.

Illumina HiSeq 2000 (Tupaia chinensis)

Organism:
Tupaia chinensis
1 Series
7 Samples
Download data
Platform
Accession:
GPL15772
ID:
100015772
11.

TreeShrew2_neun_pos

Organism:
Tupaia chinensis
Source name:
Retina
Platform:
GPL33302
Series:
GSE237213 GSE237215
Download data
Sample
Accession:
GSM7596934
ID:
307596934
12.

TreeShrew2_neun_chx10_neg

Organism:
Tupaia chinensis
Source name:
Retina
Platform:
GPL33302
Series:
GSE237213 GSE237215
Download data
Sample
Accession:
GSM7596933
ID:
307596933
13.

TreeShrew2_chx10_pos

Organism:
Tupaia chinensis
Source name:
Retina
Platform:
GPL33302
Series:
GSE237213 GSE237215
Download data
Sample
Accession:
GSM7596932
ID:
307596932
14.

TreeShrew1_neun_pos

Organism:
Tupaia chinensis
Source name:
Retina
Platform:
GPL33302
Series:
GSE237213 GSE237215
Download data
Sample
Accession:
GSM7596931
ID:
307596931
15.

TreeShrew1_neun_chx10_neg

Organism:
Tupaia chinensis
Source name:
Retina
Platform:
GPL33302
Series:
GSE237213 GSE237215
Download data
Sample
Accession:
GSM7596930
ID:
307596930
16.

TreeShrew1_chx10_pos

Organism:
Tupaia chinensis
Source name:
Retina
Platform:
GPL33302
Series:
GSE237213 GSE237215
Download data
Sample
Accession:
GSM7596929
ID:
307596929
17.

TreeShrew_Chx10

Organism:
Tupaia chinensis
Source name:
Retina
Platform:
GPL33302
Series:
GSE237213 GSE237215
Download data
Sample
Accession:
GSM7596928
ID:
307596928
18.

TreeShrew_Nueun

Organism:
Tupaia chinensis
Source name:
Retina
Platform:
GPL33302
Series:
GSE237213 GSE237215
Download data
Sample
Accession:
GSM7596927
ID:
307596927
19.

NR-2

Organism:
Tupaia chinensis
Source name:
cell line
Platform:
GPL33302
Series:
GSE228744
Download data: TXT
Sample
Accession:
GSM7135810
ID:
307135810
20.

NR-1

Organism:
Tupaia chinensis
Source name:
cell line
Platform:
GPL33302
Series:
GSE228744
Download data: TXT
Sample
Accession:
GSM7135809
ID:
307135809
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