GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Danio rerio; Didelphis marsupialis; Peromyscus maniculatus; Tupaia chinensis; Callithrix jacchus; Ovis aries; Mustela putorius furo; Bos taurus; Anolis sagrei; Ictidomys tridecemlineatus; Homo sapiens; Sus scrofa domesticus; Rhabdomys pumilio

Type:

Expression profiling by high throughput sequencing

13 related Platforms

118 Samples

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(Submitter supplied) The basic plan of the retina is conserved across vertebrates, yet species differ profoundly in their visual needs (Baden et al., 2020). One might expect that retinal cell types evolved to accommodate these varied needs, but this has not been systematically studied. Here, we generated and integrated single-cell transcriptomic atlases of the retina from 17 species: humans, two non-human primates, four rodents, three ungulates, opossum, ferret, tree shrew, a teleost fish, a bird, a reptile and a lamprey. more...

Organism:

Tupaia chinensis

Type:

Expression profiling by high throughput sequencing

Platform:

GPL33302

8 Samples

Download data: CSV

(Submitter supplied) Purpose: The goals of this study are to clarify influence of long-term expansion on the spermatogenesis potential of tree shrew spermatogonial stem cells （SSCs）

Organism:

Tupaia chinensis

Type:

Expression profiling by high throughput sequencing

Platform:

GPL33302

12 Samples

Download data: TXT

(Submitter supplied) To investigate gene expression in the tree shrew pancreatic cancer model, tumor samples were analyzed by RNA-seq and the expression profiles were compared to those of human pancreatic cancer samples (n = 30) containing KRAS, TP53, and CDKN2A/B mutations downloaded from The Cancer Genome Atlas (https://tcga-data.nci.nih.gov/) and mouse pancreatic cancer (accession no. GSE87388), which showed similar histological features

Organism:

Tupaia chinensis

Type:

Expression profiling by high throughput sequencing

Platform:

GPL24618

3 Samples

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(Submitter supplied) We analyzed the gene expression profile of the PBMC from -2dpi, 2dpi, and 6dpi ZIKV-infected treeshrew

Organism:

Tupaia chinensis

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25059

6 Samples

Download data: XLS, XLSX

(Submitter supplied) Deep sequencing of mRNA from Chinese tree shrew; Chinese tree shrew (Tupaia belangeri chinensis) is placed in Order Scandentia and embraces many unique features for a good experimental animal model. Currently, there are many attempts to employ tree shrew to establish model for a variety of human disorders such as social stress, myopia, HCV and HBV infection, and hepatocellular carcinoma .We present here a publicly available annotated genome sequence for Chinese tree shrew. more...

Organism:

Tupaia chinensis

Type:

Expression profiling by high throughput sequencing

Platform:

GPL15772

7 Samples

Download data: BEDGRAPH